Gene : Carub.0001s3140 C. rubella v1.1
Defline:  (1 of 2) 3.2.1.73 - Licheninase / Mixed linkage beta-glucanase Genomic Order:  3140
Name:  ? Carub.0001s3140 Secondary Identifier:  ? PAC:39226932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3140 0.5kb upstream 0.5kb upstream 1538 true scaffold_1: 11685834-11687371 Capsella rubella
Carub.0001s3140 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11685834-11686333 Capsella rubella
Carub.0001s3140 0.5kb downstream 0.5kb downstream 1538 true scaffold_1: 11686334-11687871 Capsella rubella
Carub.0001s3140 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11687372-11687871 Capsella rubella
Carub.0001s3140 1.0kb upstream 1.0kb upstream 2038 true scaffold_1: 11685334-11687371 Capsella rubella
Carub.0001s3140 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11685334-11686333 Capsella rubella
Carub.0001s3140 1.0kb downstream 1.0kb downstream 2038 true scaffold_1: 11686334-11688371 Capsella rubella
Carub.0001s3140 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11687372-11688371 Capsella rubella
Carub.0001s3140 2.0kb upstream 2.0kb upstream 3038 true scaffold_1: 11684334-11687371 Capsella rubella
Carub.0001s3140 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11684334-11686333 Capsella rubella
Carub.0001s3140 2.0kb downstream 2.0kb downstream 3038 true scaffold_1: 11686334-11689371 Capsella rubella
Carub.0001s3140 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11687372-11689371 Capsella rubella
Carub.0001s3140 5.0kb upstream 5.0kb upstream 6038 true scaffold_1: 11681334-11687371 Capsella rubella
Carub.0001s3140 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11681334-11686333 Capsella rubella
Carub.0001s3140 5.0kb downstream 5.0kb downstream 6038 true scaffold_1: 11686334-11692371 Capsella rubella
Carub.0001s3140 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11687372-11692371 Capsella rubella
Carub.0001s3140 10.0kb upstream 10.0kb upstream 11038 true scaffold_1: 11676334-11687371 Capsella rubella
Carub.0001s3140 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11676334-11686333 Capsella rubella
Carub.0001s3140 10.0kb downstream 10.0kb downstream 11038 true scaffold_1: 11686334-11697371 Capsella rubella
Carub.0001s3140 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11687372-11697371 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380901 5261 Brassicaceae View MSA
123802959 5264 Brassicales-Malvales View MSA
124350691 5266 SBM View MSA
124248032 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain