Gene : Carub.0001s3178 C. rubella v1.1
Defline:  (1 of 12) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  3178
Name:  ? Carub.0001s3178 Secondary Identifier:  ? PAC:39227470
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3178 0.5kb upstream 0.5kb upstream 788 true scaffold_1: 11813388-11814175 Capsella rubella
Carub.0001s3178 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11813388-11813887 Capsella rubella
Carub.0001s3178 0.5kb downstream 0.5kb downstream 788 true scaffold_1: 11813888-11814675 Capsella rubella
Carub.0001s3178 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11814176-11814675 Capsella rubella
Carub.0001s3178 1.0kb upstream 1.0kb upstream 1288 true scaffold_1: 11812888-11814175 Capsella rubella
Carub.0001s3178 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11812888-11813887 Capsella rubella
Carub.0001s3178 1.0kb downstream 1.0kb downstream 1288 true scaffold_1: 11813888-11815175 Capsella rubella
Carub.0001s3178 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11814176-11815175 Capsella rubella
Carub.0001s3178 2.0kb upstream 2.0kb upstream 2288 true scaffold_1: 11811888-11814175 Capsella rubella
Carub.0001s3178 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11811888-11813887 Capsella rubella
Carub.0001s3178 2.0kb downstream 2.0kb downstream 2288 true scaffold_1: 11813888-11816175 Capsella rubella
Carub.0001s3178 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11814176-11816175 Capsella rubella
Carub.0001s3178 5.0kb upstream 5.0kb upstream 5288 true scaffold_1: 11808888-11814175 Capsella rubella
Carub.0001s3178 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11808888-11813887 Capsella rubella
Carub.0001s3178 5.0kb downstream 5.0kb downstream 5288 true scaffold_1: 11813888-11819175 Capsella rubella
Carub.0001s3178 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11814176-11819175 Capsella rubella
Carub.0001s3178 10.0kb upstream 10.0kb upstream 10288 true scaffold_1: 11803888-11814175 Capsella rubella
Carub.0001s3178 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11803888-11813887 Capsella rubella
Carub.0001s3178 10.0kb downstream 10.0kb downstream 10288 true scaffold_1: 11813888-11824175 Capsella rubella
Carub.0001s3178 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11814176-11824175 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379501 5261 Brassicaceae View MSA
123839482 5264 Brassicales-Malvales View MSA
124350775 5266 SBM View MSA
124252906 5268 Malvidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain