Gene : Carub.0001s3239 C. rubella v1.1
Defline:  (1 of 4) PTHR33109:SF6 - EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED Genomic Order:  3239
Name:  ? Carub.0001s3239 Secondary Identifier:  ? PAC:39229646
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3239 0.5kb upstream 0.5kb upstream 1820 true scaffold_1: 12056693-12058512 Capsella rubella
Carub.0001s3239 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12056693-12057192 Capsella rubella
Carub.0001s3239 0.5kb downstream 0.5kb downstream 1820 true scaffold_1: 12057193-12059012 Capsella rubella
Carub.0001s3239 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12058513-12059012 Capsella rubella
Carub.0001s3239 1.0kb upstream 1.0kb upstream 2320 true scaffold_1: 12056193-12058512 Capsella rubella
Carub.0001s3239 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12056193-12057192 Capsella rubella
Carub.0001s3239 1.0kb downstream 1.0kb downstream 2320 true scaffold_1: 12057193-12059512 Capsella rubella
Carub.0001s3239 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12058513-12059512 Capsella rubella
Carub.0001s3239 2.0kb upstream 2.0kb upstream 3320 true scaffold_1: 12055193-12058512 Capsella rubella
Carub.0001s3239 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12055193-12057192 Capsella rubella
Carub.0001s3239 2.0kb downstream 2.0kb downstream 3320 true scaffold_1: 12057193-12060512 Capsella rubella
Carub.0001s3239 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12058513-12060512 Capsella rubella
Carub.0001s3239 5.0kb upstream 5.0kb upstream 6320 true scaffold_1: 12052193-12058512 Capsella rubella
Carub.0001s3239 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12052193-12057192 Capsella rubella
Carub.0001s3239 5.0kb downstream 5.0kb downstream 6320 true scaffold_1: 12057193-12063512 Capsella rubella
Carub.0001s3239 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12058513-12063512 Capsella rubella
Carub.0001s3239 10.0kb upstream 10.0kb upstream 11320 true scaffold_1: 12047193-12058512 Capsella rubella
Carub.0001s3239 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12047193-12057192 Capsella rubella
Carub.0001s3239 10.0kb downstream 10.0kb downstream 11320 true scaffold_1: 12057193-12068512 Capsella rubella
Carub.0001s3239 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12058513-12068512 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377801 5261 Brassicaceae View MSA
123828769 5264 Brassicales-Malvales View MSA
124339050 5266 SBM View MSA
124251653 5268 Malvidae View MSA
124066139 5270 Rosid View MSA
123748045 5271 Pentapetalae View MSA
122792387 5272 Eudicot View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain