Gene : Carub.0001s3254 C. rubella v1.1
Defline:  (1 of 5) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Genomic Order:  3254
Name:  ? Carub.0001s3254 Secondary Identifier:  ? PAC:39229912
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3254 0.5kb upstream 0.5kb upstream 3557 true scaffold_1: 12141109-12144665 Capsella rubella
Carub.0001s3254 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12141109-12141608 Capsella rubella
Carub.0001s3254 0.5kb downstream 0.5kb downstream 3557 true scaffold_1: 12141609-12145165 Capsella rubella
Carub.0001s3254 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12144666-12145165 Capsella rubella
Carub.0001s3254 1.0kb upstream 1.0kb upstream 4057 true scaffold_1: 12140609-12144665 Capsella rubella
Carub.0001s3254 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12140609-12141608 Capsella rubella
Carub.0001s3254 1.0kb downstream 1.0kb downstream 4057 true scaffold_1: 12141609-12145665 Capsella rubella
Carub.0001s3254 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12144666-12145665 Capsella rubella
Carub.0001s3254 2.0kb upstream 2.0kb upstream 5057 true scaffold_1: 12139609-12144665 Capsella rubella
Carub.0001s3254 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12139609-12141608 Capsella rubella
Carub.0001s3254 2.0kb downstream 2.0kb downstream 5057 true scaffold_1: 12141609-12146665 Capsella rubella
Carub.0001s3254 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12144666-12146665 Capsella rubella
Carub.0001s3254 5.0kb upstream 5.0kb upstream 8057 true scaffold_1: 12136609-12144665 Capsella rubella
Carub.0001s3254 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12136609-12141608 Capsella rubella
Carub.0001s3254 5.0kb downstream 5.0kb downstream 8057 true scaffold_1: 12141609-12149665 Capsella rubella
Carub.0001s3254 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12144666-12149665 Capsella rubella
Carub.0001s3254 10.0kb upstream 10.0kb upstream 13057 true scaffold_1: 12131609-12144665 Capsella rubella
Carub.0001s3254 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12131609-12141608 Capsella rubella
Carub.0001s3254 10.0kb downstream 10.0kb downstream 13057 true scaffold_1: 12141609-12154665 Capsella rubella
Carub.0001s3254 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12144666-12154665 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377753 5261 Brassicaceae View MSA
123801625 5264 Brassicales-Malvales View MSA
124298903 5266 SBM View MSA
124150441 5268 Malvidae View MSA
124051893 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain