Gene : Carub.0001s2963 C. rubella v1.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  2963
Name:  ? Carub.0001s2963 Secondary Identifier:  ? PAC:39231047
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HOMOSERSYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  
Crubella PWY-5097 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  
Crubella THRESYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2963 0.5kb upstream 0.5kb upstream 5255 true scaffold_1: 10902430-10907684 Capsella rubella
Carub.0001s2963 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10907185-10907684 Capsella rubella
Carub.0001s2963 0.5kb downstream 0.5kb downstream 5255 true scaffold_1: 10901930-10907184 Capsella rubella
Carub.0001s2963 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10901930-10902429 Capsella rubella
Carub.0001s2963 1.0kb upstream 1.0kb upstream 5755 true scaffold_1: 10902430-10908184 Capsella rubella
Carub.0001s2963 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10907185-10908184 Capsella rubella
Carub.0001s2963 1.0kb downstream 1.0kb downstream 5755 true scaffold_1: 10901430-10907184 Capsella rubella
Carub.0001s2963 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10901430-10902429 Capsella rubella
Carub.0001s2963 2.0kb upstream 2.0kb upstream 6755 true scaffold_1: 10902430-10909184 Capsella rubella
Carub.0001s2963 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10907185-10909184 Capsella rubella
Carub.0001s2963 2.0kb downstream 2.0kb downstream 6755 true scaffold_1: 10900430-10907184 Capsella rubella
Carub.0001s2963 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10900430-10902429 Capsella rubella
Carub.0001s2963 5.0kb upstream 5.0kb upstream 9755 true scaffold_1: 10902430-10912184 Capsella rubella
Carub.0001s2963 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10907185-10912184 Capsella rubella
Carub.0001s2963 5.0kb downstream 5.0kb downstream 9755 true scaffold_1: 10897430-10907184 Capsella rubella
Carub.0001s2963 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10897430-10902429 Capsella rubella
Carub.0001s2963 10.0kb upstream 10.0kb upstream 14755 true scaffold_1: 10902430-10917184 Capsella rubella
Carub.0001s2963 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10907185-10917184 Capsella rubella
Carub.0001s2963 10.0kb downstream 10.0kb downstream 14755 true scaffold_1: 10892430-10907184 Capsella rubella
Carub.0001s2963 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10892430-10902429 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363232 5261 Brassicaceae View MSA
123837065 5264 Brassicales-Malvales View MSA
124346025 5266 SBM View MSA
124243959 5268 Malvidae View MSA
124067286 5270 Rosid View MSA
123739285 5271 Pentapetalae View MSA
122788186 5272 Eudicot View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain