Gene : Carub.0001s3072 C. rubella v1.1
Defline:  (1 of 1) PTHR31803//PTHR31803:SF7 - FAMILY NOT NAMED // UBIQUINOL OXIDASE 3, MITOCHONDRIAL Genomic Order:  3072
Name:  ? Carub.0001s3072 Secondary Identifier:  ? PAC:39227120
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4302 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3072 0.5kb upstream 0.5kb upstream 1863 true scaffold_1: 11361505-11363367 Capsella rubella
Carub.0001s3072 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11362868-11363367 Capsella rubella
Carub.0001s3072 0.5kb downstream 0.5kb downstream 1863 true scaffold_1: 11361005-11362867 Capsella rubella
Carub.0001s3072 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11361005-11361504 Capsella rubella
Carub.0001s3072 1.0kb upstream 1.0kb upstream 2363 true scaffold_1: 11361505-11363867 Capsella rubella
Carub.0001s3072 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11362868-11363867 Capsella rubella
Carub.0001s3072 1.0kb downstream 1.0kb downstream 2363 true scaffold_1: 11360505-11362867 Capsella rubella
Carub.0001s3072 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11360505-11361504 Capsella rubella
Carub.0001s3072 2.0kb upstream 2.0kb upstream 3363 true scaffold_1: 11361505-11364867 Capsella rubella
Carub.0001s3072 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11362868-11364867 Capsella rubella
Carub.0001s3072 2.0kb downstream 2.0kb downstream 3363 true scaffold_1: 11359505-11362867 Capsella rubella
Carub.0001s3072 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11359505-11361504 Capsella rubella
Carub.0001s3072 5.0kb upstream 5.0kb upstream 6363 true scaffold_1: 11361505-11367867 Capsella rubella
Carub.0001s3072 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11362868-11367867 Capsella rubella
Carub.0001s3072 5.0kb downstream 5.0kb downstream 6363 true scaffold_1: 11356505-11362867 Capsella rubella
Carub.0001s3072 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11356505-11361504 Capsella rubella
Carub.0001s3072 10.0kb upstream 10.0kb upstream 11363 true scaffold_1: 11361505-11372867 Capsella rubella
Carub.0001s3072 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11362868-11372867 Capsella rubella
Carub.0001s3072 10.0kb downstream 10.0kb downstream 11363 true scaffold_1: 11351505-11362867 Capsella rubella
Carub.0001s3072 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11351505-11361504 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367042 5261 Brassicaceae View MSA
123799283 5264 Brassicales-Malvales View MSA
124296819 5266 SBM View MSA
124240126 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain