Gene : Carub.0001s3108 C. rubella v1.1
Defline:  (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) Genomic Order:  3108
Name:  ? Carub.0001s3108 Secondary Identifier:  ? PAC:39228190
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3108 0.5kb upstream 0.5kb upstream 10989 true scaffold_1: 11528271-11539259 Capsella rubella
Carub.0001s3108 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11538760-11539259 Capsella rubella
Carub.0001s3108 0.5kb downstream 0.5kb downstream 10989 true scaffold_1: 11527771-11538759 Capsella rubella
Carub.0001s3108 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11527771-11528270 Capsella rubella
Carub.0001s3108 1.0kb upstream 1.0kb upstream 11489 true scaffold_1: 11528271-11539759 Capsella rubella
Carub.0001s3108 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11538760-11539759 Capsella rubella
Carub.0001s3108 1.0kb downstream 1.0kb downstream 11489 true scaffold_1: 11527271-11538759 Capsella rubella
Carub.0001s3108 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11527271-11528270 Capsella rubella
Carub.0001s3108 2.0kb upstream 2.0kb upstream 12489 true scaffold_1: 11528271-11540759 Capsella rubella
Carub.0001s3108 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11538760-11540759 Capsella rubella
Carub.0001s3108 2.0kb downstream 2.0kb downstream 12489 true scaffold_1: 11526271-11538759 Capsella rubella
Carub.0001s3108 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11526271-11528270 Capsella rubella
Carub.0001s3108 5.0kb upstream 5.0kb upstream 15489 true scaffold_1: 11528271-11543759 Capsella rubella
Carub.0001s3108 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11538760-11543759 Capsella rubella
Carub.0001s3108 5.0kb downstream 5.0kb downstream 15489 true scaffold_1: 11523271-11538759 Capsella rubella
Carub.0001s3108 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11523271-11528270 Capsella rubella
Carub.0001s3108 10.0kb upstream 10.0kb upstream 20489 true scaffold_1: 11528271-11548759 Capsella rubella
Carub.0001s3108 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11538760-11548759 Capsella rubella
Carub.0001s3108 10.0kb downstream 10.0kb downstream 20489 true scaffold_1: 11518271-11538759 Capsella rubella
Carub.0001s3108 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11518271-11528270 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373235 5261 Brassicaceae View MSA
123831121 5264 Brassicales-Malvales View MSA
124337070 5266 SBM View MSA
124251437 5268 Malvidae View MSA
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain