Gene : Carub.0001s2857 C. rubella v1.1
Defline:  (1 of 1) PTHR31403//PTHR31403:SF13 - FAMILY NOT NAMED // DAD1-LIKE ACYLHYDROLASE Genomic Order:  2857
Name:  ? Carub.0001s2857 Secondary Identifier:  ? PAC:39227197
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPASYN-PWY Capsella rubella pathologic  
Crubella PWY-6803 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2857 0.5kb upstream 0.5kb upstream 2178 true scaffold_1: 10484352-10486529 Capsella rubella
Carub.0001s2857 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10486030-10486529 Capsella rubella
Carub.0001s2857 0.5kb downstream 0.5kb downstream 2178 true scaffold_1: 10483852-10486029 Capsella rubella
Carub.0001s2857 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10483852-10484351 Capsella rubella
Carub.0001s2857 1.0kb upstream 1.0kb upstream 2678 true scaffold_1: 10484352-10487029 Capsella rubella
Carub.0001s2857 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10486030-10487029 Capsella rubella
Carub.0001s2857 1.0kb downstream 1.0kb downstream 2678 true scaffold_1: 10483352-10486029 Capsella rubella
Carub.0001s2857 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10483352-10484351 Capsella rubella
Carub.0001s2857 2.0kb upstream 2.0kb upstream 3678 true scaffold_1: 10484352-10488029 Capsella rubella
Carub.0001s2857 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10486030-10488029 Capsella rubella
Carub.0001s2857 2.0kb downstream 2.0kb downstream 3678 true scaffold_1: 10482352-10486029 Capsella rubella
Carub.0001s2857 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10482352-10484351 Capsella rubella
Carub.0001s2857 5.0kb upstream 5.0kb upstream 6678 true scaffold_1: 10484352-10491029 Capsella rubella
Carub.0001s2857 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10486030-10491029 Capsella rubella
Carub.0001s2857 5.0kb downstream 5.0kb downstream 6678 true scaffold_1: 10479352-10486029 Capsella rubella
Carub.0001s2857 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10479352-10484351 Capsella rubella
Carub.0001s2857 10.0kb upstream 10.0kb upstream 11678 true scaffold_1: 10484352-10496029 Capsella rubella
Carub.0001s2857 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10486030-10496029 Capsella rubella
Carub.0001s2857 10.0kb downstream 10.0kb downstream 11678 true scaffold_1: 10474352-10486029 Capsella rubella
Carub.0001s2857 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10474352-10484351 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362115 5261 Brassicaceae View MSA
123832765 5264 Brassicales-Malvales View MSA
124347502 5266 SBM View MSA
124242797 5268 Malvidae View MSA
124070138 5270 Rosid View MSA
123750987 5271 Pentapetalae View MSA
122791980 5272 Eudicot View MSA
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain