Gene : Carub.0001s2992 C. rubella v1.1
Defline:  (1 of 1) PTHR12121//PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  2992
Name:  ? Carub.0001s2992 Secondary Identifier:  ? PAC:39227947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2992 0.5kb upstream 0.5kb upstream 2996 true scaffold_1: 11013343-11016338 Capsella rubella
Carub.0001s2992 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11015839-11016338 Capsella rubella
Carub.0001s2992 0.5kb downstream 0.5kb downstream 2996 true scaffold_1: 11012843-11015838 Capsella rubella
Carub.0001s2992 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11012843-11013342 Capsella rubella
Carub.0001s2992 1.0kb upstream 1.0kb upstream 3496 true scaffold_1: 11013343-11016838 Capsella rubella
Carub.0001s2992 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11015839-11016838 Capsella rubella
Carub.0001s2992 1.0kb downstream 1.0kb downstream 3496 true scaffold_1: 11012343-11015838 Capsella rubella
Carub.0001s2992 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11012343-11013342 Capsella rubella
Carub.0001s2992 2.0kb upstream 2.0kb upstream 4496 true scaffold_1: 11013343-11017838 Capsella rubella
Carub.0001s2992 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11015839-11017838 Capsella rubella
Carub.0001s2992 2.0kb downstream 2.0kb downstream 4496 true scaffold_1: 11011343-11015838 Capsella rubella
Carub.0001s2992 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11011343-11013342 Capsella rubella
Carub.0001s2992 5.0kb upstream 5.0kb upstream 7496 true scaffold_1: 11013343-11020838 Capsella rubella
Carub.0001s2992 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11015839-11020838 Capsella rubella
Carub.0001s2992 5.0kb downstream 5.0kb downstream 7496 true scaffold_1: 11008343-11015838 Capsella rubella
Carub.0001s2992 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11008343-11013342 Capsella rubella
Carub.0001s2992 10.0kb upstream 10.0kb upstream 12496 true scaffold_1: 11013343-11025838 Capsella rubella
Carub.0001s2992 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11015839-11025838 Capsella rubella
Carub.0001s2992 10.0kb downstream 10.0kb downstream 12496 true scaffold_1: 11003343-11015838 Capsella rubella
Carub.0001s2992 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11003343-11013342 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374949 5261 Brassicaceae View MSA
123839808 5264 Brassicales-Malvales View MSA
124341518 5266 SBM View MSA
124240125 5268 Malvidae View MSA
124063704 5270 Rosid View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain