Gene : Carub.0005s2889 C. rubella v1.1
Defline:  (1 of 1) PTHR13495//PTHR13495:SF0 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 // PROTEIN FAM192A Genomic Order:  2889
Name:  ? Carub.0005s2889 Secondary Identifier:  ? PAC:39225621
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2889 0.5kb upstream 0.5kb upstream 2179 true scaffold_5: 13274220-13276398 Capsella rubella
Carub.0005s2889 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13274220-13274719 Capsella rubella
Carub.0005s2889 0.5kb downstream 0.5kb downstream 2179 true scaffold_5: 13274720-13276898 Capsella rubella
Carub.0005s2889 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13276399-13276898 Capsella rubella
Carub.0005s2889 1.0kb upstream 1.0kb upstream 2679 true scaffold_5: 13273720-13276398 Capsella rubella
Carub.0005s2889 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13273720-13274719 Capsella rubella
Carub.0005s2889 1.0kb downstream 1.0kb downstream 2679 true scaffold_5: 13274720-13277398 Capsella rubella
Carub.0005s2889 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13276399-13277398 Capsella rubella
Carub.0005s2889 2.0kb upstream 2.0kb upstream 3679 true scaffold_5: 13272720-13276398 Capsella rubella
Carub.0005s2889 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13272720-13274719 Capsella rubella
Carub.0005s2889 2.0kb downstream 2.0kb downstream 3679 true scaffold_5: 13274720-13278398 Capsella rubella
Carub.0005s2889 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13276399-13278398 Capsella rubella
Carub.0005s2889 5.0kb upstream 5.0kb upstream 6679 true scaffold_5: 13269720-13276398 Capsella rubella
Carub.0005s2889 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13269720-13274719 Capsella rubella
Carub.0005s2889 5.0kb downstream 5.0kb downstream 6679 true scaffold_5: 13274720-13281398 Capsella rubella
Carub.0005s2889 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13276399-13281398 Capsella rubella
Carub.0005s2889 10.0kb upstream 10.0kb upstream 11679 true scaffold_5: 13264720-13276398 Capsella rubella
Carub.0005s2889 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13264720-13274719 Capsella rubella
Carub.0005s2889 10.0kb downstream 10.0kb downstream 11679 true scaffold_5: 13274720-13286398 Capsella rubella
Carub.0005s2889 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13276399-13286398 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366192 5261 Brassicaceae View MSA
123830029 5264 Brassicales-Malvales View MSA
124343062 5266 SBM View MSA
124241413 5268 Malvidae View MSA
124063271 5270 Rosid View MSA
123737480 5271 Pentapetalae View MSA
122787094 5272 Eudicot View MSA
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain