Gene : Carub.0005s2913 C. rubella v1.1
Defline:  (1 of 2) PTHR33921//PTHR33921:SF2 - FAMILY NOT NAMED // CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  2913
Name:  ? Carub.0005s2913 Secondary Identifier:  ? PAC:39226845
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2913 0.5kb upstream 0.5kb upstream 1022 true scaffold_5: 13356658-13357679 Capsella rubella
Carub.0005s2913 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13356658-13357157 Capsella rubella
Carub.0005s2913 0.5kb downstream 0.5kb downstream 1022 true scaffold_5: 13357158-13358179 Capsella rubella
Carub.0005s2913 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13357680-13358179 Capsella rubella
Carub.0005s2913 1.0kb upstream 1.0kb upstream 1522 true scaffold_5: 13356158-13357679 Capsella rubella
Carub.0005s2913 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13356158-13357157 Capsella rubella
Carub.0005s2913 1.0kb downstream 1.0kb downstream 1522 true scaffold_5: 13357158-13358679 Capsella rubella
Carub.0005s2913 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13357680-13358679 Capsella rubella
Carub.0005s2913 2.0kb upstream 2.0kb upstream 2522 true scaffold_5: 13355158-13357679 Capsella rubella
Carub.0005s2913 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13355158-13357157 Capsella rubella
Carub.0005s2913 2.0kb downstream 2.0kb downstream 2522 true scaffold_5: 13357158-13359679 Capsella rubella
Carub.0005s2913 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13357680-13359679 Capsella rubella
Carub.0005s2913 5.0kb upstream 5.0kb upstream 5522 true scaffold_5: 13352158-13357679 Capsella rubella
Carub.0005s2913 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13352158-13357157 Capsella rubella
Carub.0005s2913 5.0kb downstream 5.0kb downstream 5522 true scaffold_5: 13357158-13362679 Capsella rubella
Carub.0005s2913 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13357680-13362679 Capsella rubella
Carub.0005s2913 10.0kb upstream 10.0kb upstream 10522 true scaffold_5: 13347158-13357679 Capsella rubella
Carub.0005s2913 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13347158-13357157 Capsella rubella
Carub.0005s2913 10.0kb downstream 10.0kb downstream 10522 true scaffold_5: 13357158-13367679 Capsella rubella
Carub.0005s2913 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13357680-13367679 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781832 5273 Angiosperm View MSA
122334935 5261 Brassicaceae Singleton cluster - no MSA
123775732 5264 Brassicales-Malvales Singleton cluster - no MSA
124274132 5266 SBM Singleton cluster - no MSA
124129648 5268 Malvidae Singleton cluster - no MSA
123858177 5270 Rosid Singleton cluster - no MSA
123750712 5271 Pentapetalae View MSA
122773812 5272 Eudicot View MSA
121053393 5274 Embryophyte View MSA
123093416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain