Gene : Carub.0001s2682 C. rubella v1.1
Defline:  (1 of 146) PF00847 - AP2 domain (AP2) Genomic Order:  2682
Name:  ? Carub.0001s2682 Secondary Identifier:  ? PAC:39230529
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2682 0.5kb upstream 0.5kb upstream 1473 true scaffold_1: 9744928-9746400 Capsella rubella
Carub.0001s2682 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9744928-9745427 Capsella rubella
Carub.0001s2682 0.5kb downstream 0.5kb downstream 1473 true scaffold_1: 9745428-9746900 Capsella rubella
Carub.0001s2682 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9746401-9746900 Capsella rubella
Carub.0001s2682 1.0kb upstream 1.0kb upstream 1973 true scaffold_1: 9744428-9746400 Capsella rubella
Carub.0001s2682 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9744428-9745427 Capsella rubella
Carub.0001s2682 1.0kb downstream 1.0kb downstream 1973 true scaffold_1: 9745428-9747400 Capsella rubella
Carub.0001s2682 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9746401-9747400 Capsella rubella
Carub.0001s2682 2.0kb upstream 2.0kb upstream 2973 true scaffold_1: 9743428-9746400 Capsella rubella
Carub.0001s2682 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9743428-9745427 Capsella rubella
Carub.0001s2682 2.0kb downstream 2.0kb downstream 2973 true scaffold_1: 9745428-9748400 Capsella rubella
Carub.0001s2682 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9746401-9748400 Capsella rubella
Carub.0001s2682 5.0kb upstream 5.0kb upstream 5973 true scaffold_1: 9740428-9746400 Capsella rubella
Carub.0001s2682 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9740428-9745427 Capsella rubella
Carub.0001s2682 5.0kb downstream 5.0kb downstream 5973 true scaffold_1: 9745428-9751400 Capsella rubella
Carub.0001s2682 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9746401-9751400 Capsella rubella
Carub.0001s2682 10.0kb upstream 10.0kb upstream 10973 true scaffold_1: 9735428-9746400 Capsella rubella
Carub.0001s2682 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9735428-9745427 Capsella rubella
Carub.0001s2682 10.0kb downstream 10.0kb downstream 10973 true scaffold_1: 9745428-9756400 Capsella rubella
Carub.0001s2682 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9746401-9756400 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371107 5261 Brassicaceae View MSA
123831191 5264 Brassicales-Malvales View MSA
124350154 5266 SBM View MSA
124251534 5268 Malvidae View MSA
124064356 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain