Gene : Carub.0001s2685 C. rubella v1.1
Defline:  (1 of 1) PTHR33199//PTHR33199:SF8 - FAMILY NOT NAMED // MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  2685
Name:  ? Carub.0001s2685 Secondary Identifier:  ? PAC:39228107
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2685 0.5kb upstream 0.5kb upstream 3233 true scaffold_1: 9756502-9759734 Capsella rubella
Carub.0001s2685 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9756502-9757001 Capsella rubella
Carub.0001s2685 0.5kb downstream 0.5kb downstream 3233 true scaffold_1: 9757002-9760234 Capsella rubella
Carub.0001s2685 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9759735-9760234 Capsella rubella
Carub.0001s2685 1.0kb upstream 1.0kb upstream 3733 true scaffold_1: 9756002-9759734 Capsella rubella
Carub.0001s2685 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9756002-9757001 Capsella rubella
Carub.0001s2685 1.0kb downstream 1.0kb downstream 3733 true scaffold_1: 9757002-9760734 Capsella rubella
Carub.0001s2685 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9759735-9760734 Capsella rubella
Carub.0001s2685 2.0kb upstream 2.0kb upstream 4733 true scaffold_1: 9755002-9759734 Capsella rubella
Carub.0001s2685 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9755002-9757001 Capsella rubella
Carub.0001s2685 2.0kb downstream 2.0kb downstream 4733 true scaffold_1: 9757002-9761734 Capsella rubella
Carub.0001s2685 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9759735-9761734 Capsella rubella
Carub.0001s2685 5.0kb upstream 5.0kb upstream 7733 true scaffold_1: 9752002-9759734 Capsella rubella
Carub.0001s2685 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9752002-9757001 Capsella rubella
Carub.0001s2685 5.0kb downstream 5.0kb downstream 7733 true scaffold_1: 9757002-9764734 Capsella rubella
Carub.0001s2685 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9759735-9764734 Capsella rubella
Carub.0001s2685 10.0kb upstream 10.0kb upstream 12733 true scaffold_1: 9747002-9759734 Capsella rubella
Carub.0001s2685 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9747002-9757001 Capsella rubella
Carub.0001s2685 10.0kb downstream 10.0kb downstream 12733 true scaffold_1: 9757002-9769734 Capsella rubella
Carub.0001s2685 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9759735-9769734 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368025 5261 Brassicaceae View MSA
123835709 5264 Brassicales-Malvales View MSA
124341944 5266 SBM View MSA
124240768 5268 Malvidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain