Gene : Carub.0001s0753 C. rubella v1.1

Defline:  (1 of 6) K11252 - histone H2B (H2B) Genomic Order:  753
Name:  ? Carub.0001s0753 Secondary Identifier:  ? PAC:39227094

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0753 0.5kb upstream 0.5kb upstream 1735 true scaffold_1: 2635601-2637335 Capsella rubella
Carub.0001s0753 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2636836-2637335 Capsella rubella
Carub.0001s0753 0.5kb downstream 0.5kb downstream 1735 true scaffold_1: 2635101-2636835 Capsella rubella
Carub.0001s0753 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2635101-2635600 Capsella rubella
Carub.0001s0753 1.0kb upstream 1.0kb upstream 2235 true scaffold_1: 2635601-2637835 Capsella rubella
Carub.0001s0753 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2636836-2637835 Capsella rubella
Carub.0001s0753 1.0kb downstream 1.0kb downstream 2235 true scaffold_1: 2634601-2636835 Capsella rubella
Carub.0001s0753 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2634601-2635600 Capsella rubella
Carub.0001s0753 2.0kb upstream 2.0kb upstream 3235 true scaffold_1: 2635601-2638835 Capsella rubella
Carub.0001s0753 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2636836-2638835 Capsella rubella
Carub.0001s0753 2.0kb downstream 2.0kb downstream 3235 true scaffold_1: 2633601-2636835 Capsella rubella
Carub.0001s0753 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2633601-2635600 Capsella rubella
Carub.0001s0753 5.0kb upstream 5.0kb upstream 6235 true scaffold_1: 2635601-2641835 Capsella rubella
Carub.0001s0753 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2636836-2641835 Capsella rubella
Carub.0001s0753 5.0kb downstream 5.0kb downstream 6235 true scaffold_1: 2630601-2636835 Capsella rubella
Carub.0001s0753 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2630601-2635600 Capsella rubella
Carub.0001s0753 10.0kb upstream 10.0kb upstream 11235 true scaffold_1: 2635601-2646835 Capsella rubella
Carub.0001s0753 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2636836-2646835 Capsella rubella
Carub.0001s0753 10.0kb downstream 10.0kb downstream 11235 true scaffold_1: 2625601-2636835 Capsella rubella
Carub.0001s0753 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2625601-2635600 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377286 5261 Brassicaceae View MSA
123835718 5264 Brassicales-Malvales View MSA
124342561 5266 SBM View MSA
124254402 5268 Malvidae View MSA
124073905 5270 Rosid View MSA
123752654 5271 Pentapetalae View MSA
122797852 5272 Eudicot View MSA
122049955 5273 Angiosperm View MSA
121350450 5274 Embryophyte View MSA
123426951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain