Gene : Carub.0001s0392 C. rubella v1.1
Defline:  (1 of 7) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  392
Name:  ? Carub.0001s0392 Secondary Identifier:  ? PAC:39231454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0392 0.5kb upstream 0.5kb upstream 1161 true scaffold_1: 1374044-1375204 Capsella rubella
Carub.0001s0392 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1374044-1374543 Capsella rubella
Carub.0001s0392 0.5kb downstream 0.5kb downstream 1161 true scaffold_1: 1374544-1375704 Capsella rubella
Carub.0001s0392 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1375205-1375704 Capsella rubella
Carub.0001s0392 1.0kb upstream 1.0kb upstream 1661 true scaffold_1: 1373544-1375204 Capsella rubella
Carub.0001s0392 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1373544-1374543 Capsella rubella
Carub.0001s0392 1.0kb downstream 1.0kb downstream 1661 true scaffold_1: 1374544-1376204 Capsella rubella
Carub.0001s0392 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1375205-1376204 Capsella rubella
Carub.0001s0392 2.0kb upstream 2.0kb upstream 2661 true scaffold_1: 1372544-1375204 Capsella rubella
Carub.0001s0392 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1372544-1374543 Capsella rubella
Carub.0001s0392 2.0kb downstream 2.0kb downstream 2661 true scaffold_1: 1374544-1377204 Capsella rubella
Carub.0001s0392 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1375205-1377204 Capsella rubella
Carub.0001s0392 5.0kb upstream 5.0kb upstream 5661 true scaffold_1: 1369544-1375204 Capsella rubella
Carub.0001s0392 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1369544-1374543 Capsella rubella
Carub.0001s0392 5.0kb downstream 5.0kb downstream 5661 true scaffold_1: 1374544-1380204 Capsella rubella
Carub.0001s0392 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1375205-1380204 Capsella rubella
Carub.0001s0392 10.0kb upstream 10.0kb upstream 10661 true scaffold_1: 1364544-1375204 Capsella rubella
Carub.0001s0392 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1364544-1374543 Capsella rubella
Carub.0001s0392 10.0kb downstream 10.0kb downstream 10661 true scaffold_1: 1374544-1385204 Capsella rubella
Carub.0001s0392 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1375205-1385204 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362510 5261 Brassicaceae View MSA
123798376 5264 Brassicales-Malvales View MSA
124296019 5266 SBM View MSA
124250610 5268 Malvidae View MSA
124069395 5270 Rosid View MSA
123745905 5271 Pentapetalae View MSA
122794941 5272 Eudicot View MSA
122046786 5273 Angiosperm View MSA
121310658 5274 Embryophyte View MSA
123348087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain