Gene : Carub.0001s0149 C. rubella v1.1
Defline:  (1 of 1) K02258 - cytochrome c oxidase assembly protein subunit 11 (COX11) Genomic Order:  149
Name:  ? Carub.0001s0149 Secondary Identifier:  ? PAC:39231653
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0149 0.5kb upstream 0.5kb upstream 2515 true scaffold_1: 515966-518480 Capsella rubella
Carub.0001s0149 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 515966-516465 Capsella rubella
Carub.0001s0149 0.5kb downstream 0.5kb downstream 2515 true scaffold_1: 516466-518980 Capsella rubella
Carub.0001s0149 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 518481-518980 Capsella rubella
Carub.0001s0149 1.0kb upstream 1.0kb upstream 3015 true scaffold_1: 515466-518480 Capsella rubella
Carub.0001s0149 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 515466-516465 Capsella rubella
Carub.0001s0149 1.0kb downstream 1.0kb downstream 3015 true scaffold_1: 516466-519480 Capsella rubella
Carub.0001s0149 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 518481-519480 Capsella rubella
Carub.0001s0149 2.0kb upstream 2.0kb upstream 4015 true scaffold_1: 514466-518480 Capsella rubella
Carub.0001s0149 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 514466-516465 Capsella rubella
Carub.0001s0149 2.0kb downstream 2.0kb downstream 4015 true scaffold_1: 516466-520480 Capsella rubella
Carub.0001s0149 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 518481-520480 Capsella rubella
Carub.0001s0149 5.0kb upstream 5.0kb upstream 7015 true scaffold_1: 511466-518480 Capsella rubella
Carub.0001s0149 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 511466-516465 Capsella rubella
Carub.0001s0149 5.0kb downstream 5.0kb downstream 7015 true scaffold_1: 516466-523480 Capsella rubella
Carub.0001s0149 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 518481-523480 Capsella rubella
Carub.0001s0149 10.0kb upstream 10.0kb upstream 12015 true scaffold_1: 506466-518480 Capsella rubella
Carub.0001s0149 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 506466-516465 Capsella rubella
Carub.0001s0149 10.0kb downstream 10.0kb downstream 12015 true scaffold_1: 516466-528480 Capsella rubella
Carub.0001s0149 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 518481-528480 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367441 5261 Brassicaceae View MSA
123829285 5264 Brassicales-Malvales View MSA
124344241 5266 SBM View MSA
124250722 5268 Malvidae View MSA
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain