Gene : Carub.0001s0592 C. rubella v1.1
Defline:  (1 of 1) PTHR11941//PTHR11941:SF94 - ENOYL-COA HYDRATASE-RELATED // 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  592
Name:  ? Carub.0001s0592 Secondary Identifier:  ? PAC:39231449
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7574 Capsella rubella pathologic  
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0592 0.5kb upstream 0.5kb upstream 3462 true scaffold_1: 2068170-2071631 Capsella rubella
Carub.0001s0592 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2071132-2071631 Capsella rubella
Carub.0001s0592 0.5kb downstream 0.5kb downstream 3462 true scaffold_1: 2067670-2071131 Capsella rubella
Carub.0001s0592 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2067670-2068169 Capsella rubella
Carub.0001s0592 1.0kb upstream 1.0kb upstream 3962 true scaffold_1: 2068170-2072131 Capsella rubella
Carub.0001s0592 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2071132-2072131 Capsella rubella
Carub.0001s0592 1.0kb downstream 1.0kb downstream 3962 true scaffold_1: 2067170-2071131 Capsella rubella
Carub.0001s0592 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2067170-2068169 Capsella rubella
Carub.0001s0592 2.0kb upstream 2.0kb upstream 4962 true scaffold_1: 2068170-2073131 Capsella rubella
Carub.0001s0592 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2071132-2073131 Capsella rubella
Carub.0001s0592 2.0kb downstream 2.0kb downstream 4962 true scaffold_1: 2066170-2071131 Capsella rubella
Carub.0001s0592 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2066170-2068169 Capsella rubella
Carub.0001s0592 5.0kb upstream 5.0kb upstream 7962 true scaffold_1: 2068170-2076131 Capsella rubella
Carub.0001s0592 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2071132-2076131 Capsella rubella
Carub.0001s0592 5.0kb downstream 5.0kb downstream 7962 true scaffold_1: 2063170-2071131 Capsella rubella
Carub.0001s0592 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2063170-2068169 Capsella rubella
Carub.0001s0592 10.0kb upstream 10.0kb upstream 12962 true scaffold_1: 2068170-2081131 Capsella rubella
Carub.0001s0592 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2071132-2081131 Capsella rubella
Carub.0001s0592 10.0kb downstream 10.0kb downstream 12962 true scaffold_1: 2058170-2071131 Capsella rubella
Carub.0001s0592 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2058170-2068169 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366385 5261 Brassicaceae View MSA
123833395 5264 Brassicales-Malvales View MSA
124342794 5266 SBM View MSA
124237152 5268 Malvidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain