Gene : Carub.0001s0718 C. rubella v1.1
Defline:  (1 of 1) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Genomic Order:  718
Name:  ? Carub.0001s0718 Secondary Identifier:  ? PAC:39229268
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0718 0.5kb upstream 0.5kb upstream 2885 true scaffold_1: 2497689-2500573 Capsella rubella
Carub.0001s0718 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2497689-2498188 Capsella rubella
Carub.0001s0718 0.5kb downstream 0.5kb downstream 2885 true scaffold_1: 2498189-2501073 Capsella rubella
Carub.0001s0718 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2500574-2501073 Capsella rubella
Carub.0001s0718 1.0kb upstream 1.0kb upstream 3385 true scaffold_1: 2497189-2500573 Capsella rubella
Carub.0001s0718 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2497189-2498188 Capsella rubella
Carub.0001s0718 1.0kb downstream 1.0kb downstream 3385 true scaffold_1: 2498189-2501573 Capsella rubella
Carub.0001s0718 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2500574-2501573 Capsella rubella
Carub.0001s0718 2.0kb upstream 2.0kb upstream 4385 true scaffold_1: 2496189-2500573 Capsella rubella
Carub.0001s0718 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2496189-2498188 Capsella rubella
Carub.0001s0718 2.0kb downstream 2.0kb downstream 4385 true scaffold_1: 2498189-2502573 Capsella rubella
Carub.0001s0718 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2500574-2502573 Capsella rubella
Carub.0001s0718 5.0kb upstream 5.0kb upstream 7385 true scaffold_1: 2493189-2500573 Capsella rubella
Carub.0001s0718 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2493189-2498188 Capsella rubella
Carub.0001s0718 5.0kb downstream 5.0kb downstream 7385 true scaffold_1: 2498189-2505573 Capsella rubella
Carub.0001s0718 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2500574-2505573 Capsella rubella
Carub.0001s0718 10.0kb upstream 10.0kb upstream 12385 true scaffold_1: 2488189-2500573 Capsella rubella
Carub.0001s0718 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2488189-2498188 Capsella rubella
Carub.0001s0718 10.0kb downstream 10.0kb downstream 12385 true scaffold_1: 2498189-2510573 Capsella rubella
Carub.0001s0718 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2500574-2510573 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377524 5261 Brassicaceae View MSA
123827972 5264 Brassicales-Malvales View MSA
124344491 5266 SBM View MSA
124242828 5268 Malvidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain