Gene : Carub.0001s0049 C. rubella v1.1
Defline:  (1 of 2) PTHR31719//PTHR31719:SF16 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 2 Genomic Order:  49
Name:  ? Carub.0001s0049 Secondary Identifier:  ? PAC:39231696
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0049 0.5kb upstream 0.5kb upstream 1941 true scaffold_1: 158572-160512 Capsella rubella
Carub.0001s0049 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 160013-160512 Capsella rubella
Carub.0001s0049 0.5kb downstream 0.5kb downstream 1941 true scaffold_1: 158072-160012 Capsella rubella
Carub.0001s0049 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 158072-158571 Capsella rubella
Carub.0001s0049 1.0kb upstream 1.0kb upstream 2441 true scaffold_1: 158572-161012 Capsella rubella
Carub.0001s0049 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 160013-161012 Capsella rubella
Carub.0001s0049 1.0kb downstream 1.0kb downstream 2441 true scaffold_1: 157572-160012 Capsella rubella
Carub.0001s0049 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 157572-158571 Capsella rubella
Carub.0001s0049 2.0kb upstream 2.0kb upstream 3441 true scaffold_1: 158572-162012 Capsella rubella
Carub.0001s0049 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 160013-162012 Capsella rubella
Carub.0001s0049 2.0kb downstream 2.0kb downstream 3441 true scaffold_1: 156572-160012 Capsella rubella
Carub.0001s0049 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 156572-158571 Capsella rubella
Carub.0001s0049 5.0kb upstream 5.0kb upstream 6441 true scaffold_1: 158572-165012 Capsella rubella
Carub.0001s0049 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 160013-165012 Capsella rubella
Carub.0001s0049 5.0kb downstream 5.0kb downstream 6441 true scaffold_1: 153572-160012 Capsella rubella
Carub.0001s0049 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 153572-158571 Capsella rubella
Carub.0001s0049 10.0kb upstream 10.0kb upstream 11441 true scaffold_1: 158572-170012 Capsella rubella
Carub.0001s0049 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 160013-170012 Capsella rubella
Carub.0001s0049 10.0kb downstream 10.0kb downstream 11441 true scaffold_1: 148572-160012 Capsella rubella
Carub.0001s0049 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 148572-158571 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361727 5261 Brassicaceae View MSA
123829070 5264 Brassicales-Malvales View MSA
124341859 5266 SBM View MSA
124251358 5268 Malvidae View MSA
124073656 5270 Rosid View MSA
123746378 5271 Pentapetalae View MSA
122797300 5272 Eudicot View MSA
122049344 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain