Gene : Carub.0001s0097 C. rubella v1.1
Defline:  (1 of 2) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  97
Name:  ? Carub.0001s0097 Secondary Identifier:  ? PAC:39230651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0097 0.5kb upstream 0.5kb upstream 2392 true scaffold_1: 347397-349788 Capsella rubella
Carub.0001s0097 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 349289-349788 Capsella rubella
Carub.0001s0097 0.5kb downstream 0.5kb downstream 2392 true scaffold_1: 346897-349288 Capsella rubella
Carub.0001s0097 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 346897-347396 Capsella rubella
Carub.0001s0097 1.0kb upstream 1.0kb upstream 2892 true scaffold_1: 347397-350288 Capsella rubella
Carub.0001s0097 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 349289-350288 Capsella rubella
Carub.0001s0097 1.0kb downstream 1.0kb downstream 2892 true scaffold_1: 346397-349288 Capsella rubella
Carub.0001s0097 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 346397-347396 Capsella rubella
Carub.0001s0097 2.0kb upstream 2.0kb upstream 3892 true scaffold_1: 347397-351288 Capsella rubella
Carub.0001s0097 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 349289-351288 Capsella rubella
Carub.0001s0097 2.0kb downstream 2.0kb downstream 3892 true scaffold_1: 345397-349288 Capsella rubella
Carub.0001s0097 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 345397-347396 Capsella rubella
Carub.0001s0097 5.0kb upstream 5.0kb upstream 6892 true scaffold_1: 347397-354288 Capsella rubella
Carub.0001s0097 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 349289-354288 Capsella rubella
Carub.0001s0097 5.0kb downstream 5.0kb downstream 6892 true scaffold_1: 342397-349288 Capsella rubella
Carub.0001s0097 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 342397-347396 Capsella rubella
Carub.0001s0097 10.0kb upstream 10.0kb upstream 11892 true scaffold_1: 347397-359288 Capsella rubella
Carub.0001s0097 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 349289-359288 Capsella rubella
Carub.0001s0097 10.0kb downstream 10.0kb downstream 11892 true scaffold_1: 337397-349288 Capsella rubella
Carub.0001s0097 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 337397-347396 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374406 5261 Brassicaceae View MSA
123800753 5264 Brassicales-Malvales View MSA
124298126 5266 SBM View MSA
124249341 5268 Malvidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain