Gene : Carub.0001s0318 C. rubella v1.1
Defline:  (1 of 2) K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) Genomic Order:  318
Name:  ? Carub.0001s0318 Secondary Identifier:  ? PAC:39228690
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0318 0.5kb upstream 0.5kb upstream 4092 true scaffold_1: 1088301-1092392 Capsella rubella
Carub.0001s0318 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1088301-1088800 Capsella rubella
Carub.0001s0318 0.5kb downstream 0.5kb downstream 4092 true scaffold_1: 1088801-1092892 Capsella rubella
Carub.0001s0318 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1092393-1092892 Capsella rubella
Carub.0001s0318 1.0kb upstream 1.0kb upstream 4592 true scaffold_1: 1087801-1092392 Capsella rubella
Carub.0001s0318 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1087801-1088800 Capsella rubella
Carub.0001s0318 1.0kb downstream 1.0kb downstream 4592 true scaffold_1: 1088801-1093392 Capsella rubella
Carub.0001s0318 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1092393-1093392 Capsella rubella
Carub.0001s0318 2.0kb upstream 2.0kb upstream 5592 true scaffold_1: 1086801-1092392 Capsella rubella
Carub.0001s0318 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1086801-1088800 Capsella rubella
Carub.0001s0318 2.0kb downstream 2.0kb downstream 5592 true scaffold_1: 1088801-1094392 Capsella rubella
Carub.0001s0318 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1092393-1094392 Capsella rubella
Carub.0001s0318 5.0kb upstream 5.0kb upstream 8592 true scaffold_1: 1083801-1092392 Capsella rubella
Carub.0001s0318 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1083801-1088800 Capsella rubella
Carub.0001s0318 5.0kb downstream 5.0kb downstream 8592 true scaffold_1: 1088801-1097392 Capsella rubella
Carub.0001s0318 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1092393-1097392 Capsella rubella
Carub.0001s0318 10.0kb upstream 10.0kb upstream 13592 true scaffold_1: 1078801-1092392 Capsella rubella
Carub.0001s0318 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1078801-1088800 Capsella rubella
Carub.0001s0318 10.0kb downstream 10.0kb downstream 13592 true scaffold_1: 1088801-1102392 Capsella rubella
Carub.0001s0318 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1092393-1102392 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368475 5261 Brassicaceae View MSA
123832266 5264 Brassicales-Malvales View MSA
124344562 5266 SBM View MSA
124249547 5268 Malvidae View MSA
124074324 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain