Gene : Carub.0001s0683 C. rubella v1.1
Defline:  (1 of 2) K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Genomic Order:  683
Name:  ? Carub.0001s0683 Secondary Identifier:  ? PAC:39227096
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0683 0.5kb upstream 0.5kb upstream 4595 true scaffold_1: 2377690-2382284 Capsella rubella
Carub.0001s0683 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2377690-2378189 Capsella rubella
Carub.0001s0683 0.5kb downstream 0.5kb downstream 4595 true scaffold_1: 2378190-2382784 Capsella rubella
Carub.0001s0683 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2382285-2382784 Capsella rubella
Carub.0001s0683 1.0kb upstream 1.0kb upstream 5095 true scaffold_1: 2377190-2382284 Capsella rubella
Carub.0001s0683 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2377190-2378189 Capsella rubella
Carub.0001s0683 1.0kb downstream 1.0kb downstream 5095 true scaffold_1: 2378190-2383284 Capsella rubella
Carub.0001s0683 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2382285-2383284 Capsella rubella
Carub.0001s0683 2.0kb upstream 2.0kb upstream 6095 true scaffold_1: 2376190-2382284 Capsella rubella
Carub.0001s0683 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2376190-2378189 Capsella rubella
Carub.0001s0683 2.0kb downstream 2.0kb downstream 6095 true scaffold_1: 2378190-2384284 Capsella rubella
Carub.0001s0683 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2382285-2384284 Capsella rubella
Carub.0001s0683 5.0kb upstream 5.0kb upstream 9095 true scaffold_1: 2373190-2382284 Capsella rubella
Carub.0001s0683 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2373190-2378189 Capsella rubella
Carub.0001s0683 5.0kb downstream 5.0kb downstream 9095 true scaffold_1: 2378190-2387284 Capsella rubella
Carub.0001s0683 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2382285-2387284 Capsella rubella
Carub.0001s0683 10.0kb upstream 10.0kb upstream 14095 true scaffold_1: 2368190-2382284 Capsella rubella
Carub.0001s0683 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2368190-2378189 Capsella rubella
Carub.0001s0683 10.0kb downstream 10.0kb downstream 14095 true scaffold_1: 2378190-2392284 Capsella rubella
Carub.0001s0683 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2382285-2392284 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361248 5261 Brassicaceae View MSA
123837441 5264 Brassicales-Malvales View MSA
124336403 5266 SBM View MSA
124245446 5268 Malvidae View MSA
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain