Gene : Carub.0006s0259 C. rubella v1.1
Defline:  (1 of 2) PTHR21654//PTHR21654:SF5 - FAMILY NOT NAMED // TRIHELIX TRANSCRIPTION FACTOR PTL Genomic Order:  259
Name:  ? Carub.0006s0259 Secondary Identifier:  ? PAC:39246326
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0259 0.5kb upstream 0.5kb upstream 3743 true scaffold_6: 921422-925164 Capsella rubella
Carub.0006s0259 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 921422-921921 Capsella rubella
Carub.0006s0259 0.5kb downstream 0.5kb downstream 3743 true scaffold_6: 921922-925664 Capsella rubella
Carub.0006s0259 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 925165-925664 Capsella rubella
Carub.0006s0259 1.0kb upstream 1.0kb upstream 4243 true scaffold_6: 920922-925164 Capsella rubella
Carub.0006s0259 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 920922-921921 Capsella rubella
Carub.0006s0259 1.0kb downstream 1.0kb downstream 4243 true scaffold_6: 921922-926164 Capsella rubella
Carub.0006s0259 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 925165-926164 Capsella rubella
Carub.0006s0259 2.0kb upstream 2.0kb upstream 5243 true scaffold_6: 919922-925164 Capsella rubella
Carub.0006s0259 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 919922-921921 Capsella rubella
Carub.0006s0259 2.0kb downstream 2.0kb downstream 5243 true scaffold_6: 921922-927164 Capsella rubella
Carub.0006s0259 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 925165-927164 Capsella rubella
Carub.0006s0259 5.0kb upstream 5.0kb upstream 8243 true scaffold_6: 916922-925164 Capsella rubella
Carub.0006s0259 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 916922-921921 Capsella rubella
Carub.0006s0259 5.0kb downstream 5.0kb downstream 8243 true scaffold_6: 921922-930164 Capsella rubella
Carub.0006s0259 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 925165-930164 Capsella rubella
Carub.0006s0259 10.0kb upstream 10.0kb upstream 13243 true scaffold_6: 911922-925164 Capsella rubella
Carub.0006s0259 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 911922-921921 Capsella rubella
Carub.0006s0259 10.0kb downstream 10.0kb downstream 13243 true scaffold_6: 921922-935164 Capsella rubella
Carub.0006s0259 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 925165-935164 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366437 5261 Brassicaceae View MSA
123840344 5264 Brassicales-Malvales View MSA
124350171 5266 SBM View MSA
124245881 5268 Malvidae View MSA
124071653 5270 Rosid View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain