Gene : Carub.0001s0233 C. rubella v1.1
Defline:  (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD) Genomic Order:  233
Name:  ? Carub.0001s0233 Secondary Identifier:  ? PAC:39231270
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0233 0.5kb upstream 0.5kb upstream 4517 true scaffold_1: 813699-818215 Capsella rubella
Carub.0001s0233 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 813699-814198 Capsella rubella
Carub.0001s0233 0.5kb downstream 0.5kb downstream 4517 true scaffold_1: 814199-818715 Capsella rubella
Carub.0001s0233 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 818216-818715 Capsella rubella
Carub.0001s0233 1.0kb upstream 1.0kb upstream 5017 true scaffold_1: 813199-818215 Capsella rubella
Carub.0001s0233 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 813199-814198 Capsella rubella
Carub.0001s0233 1.0kb downstream 1.0kb downstream 5017 true scaffold_1: 814199-819215 Capsella rubella
Carub.0001s0233 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 818216-819215 Capsella rubella
Carub.0001s0233 2.0kb upstream 2.0kb upstream 6017 true scaffold_1: 812199-818215 Capsella rubella
Carub.0001s0233 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 812199-814198 Capsella rubella
Carub.0001s0233 2.0kb downstream 2.0kb downstream 6017 true scaffold_1: 814199-820215 Capsella rubella
Carub.0001s0233 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 818216-820215 Capsella rubella
Carub.0001s0233 5.0kb upstream 5.0kb upstream 9017 true scaffold_1: 809199-818215 Capsella rubella
Carub.0001s0233 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 809199-814198 Capsella rubella
Carub.0001s0233 5.0kb downstream 5.0kb downstream 9017 true scaffold_1: 814199-823215 Capsella rubella
Carub.0001s0233 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 818216-823215 Capsella rubella
Carub.0001s0233 10.0kb upstream 10.0kb upstream 14017 true scaffold_1: 804199-818215 Capsella rubella
Carub.0001s0233 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 804199-814198 Capsella rubella
Carub.0001s0233 10.0kb downstream 10.0kb downstream 14017 true scaffold_1: 814199-828215 Capsella rubella
Carub.0001s0233 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 818216-828215 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375319 5261 Brassicaceae View MSA
123832755 5264 Brassicales-Malvales View MSA
124340854 5266 SBM View MSA
124240996 5268 Malvidae View MSA
124062855 5270 Rosid View MSA
123737964 5271 Pentapetalae View MSA
122790118 5272 Eudicot View MSA
122046497 5273 Angiosperm View MSA
121344254 5274 Embryophyte View MSA
123426727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain