Gene : Carub.0001s0244 C. rubella v1.1
Defline:  (1 of 1) K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2) Genomic Order:  244
Name:  ? Carub.0001s0244 Secondary Identifier:  ? PAC:39227385
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0244 0.5kb upstream 0.5kb upstream 1949 true scaffold_1: 850561-852509 Capsella rubella
Carub.0001s0244 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 852010-852509 Capsella rubella
Carub.0001s0244 0.5kb downstream 0.5kb downstream 1949 true scaffold_1: 850061-852009 Capsella rubella
Carub.0001s0244 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 850061-850560 Capsella rubella
Carub.0001s0244 1.0kb upstream 1.0kb upstream 2449 true scaffold_1: 850561-853009 Capsella rubella
Carub.0001s0244 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 852010-853009 Capsella rubella
Carub.0001s0244 1.0kb downstream 1.0kb downstream 2449 true scaffold_1: 849561-852009 Capsella rubella
Carub.0001s0244 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 849561-850560 Capsella rubella
Carub.0001s0244 2.0kb upstream 2.0kb upstream 3449 true scaffold_1: 850561-854009 Capsella rubella
Carub.0001s0244 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 852010-854009 Capsella rubella
Carub.0001s0244 2.0kb downstream 2.0kb downstream 3449 true scaffold_1: 848561-852009 Capsella rubella
Carub.0001s0244 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 848561-850560 Capsella rubella
Carub.0001s0244 5.0kb upstream 5.0kb upstream 6449 true scaffold_1: 850561-857009 Capsella rubella
Carub.0001s0244 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 852010-857009 Capsella rubella
Carub.0001s0244 5.0kb downstream 5.0kb downstream 6449 true scaffold_1: 845561-852009 Capsella rubella
Carub.0001s0244 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 845561-850560 Capsella rubella
Carub.0001s0244 10.0kb upstream 10.0kb upstream 11449 true scaffold_1: 850561-862009 Capsella rubella
Carub.0001s0244 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 852010-862009 Capsella rubella
Carub.0001s0244 10.0kb downstream 10.0kb downstream 11449 true scaffold_1: 840561-852009 Capsella rubella
Carub.0001s0244 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 840561-850560 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369459 5261 Brassicaceae View MSA
123835229 5264 Brassicales-Malvales View MSA
124339903 5266 SBM View MSA
124250520 5268 Malvidae View MSA
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain