Gene : Carub.0006s0297 C. rubella v1.1
Defline:  (1 of 2) K14674 - TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase (TGL4) Genomic Order:  297
Name:  ? Carub.0006s0297 Secondary Identifier:  ? PAC:39249476
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0297 0.5kb upstream 0.5kb upstream 4009 true scaffold_6: 1079695-1083703 Capsella rubella
Carub.0006s0297 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1079695-1080194 Capsella rubella
Carub.0006s0297 0.5kb downstream 0.5kb downstream 4009 true scaffold_6: 1080195-1084203 Capsella rubella
Carub.0006s0297 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1083704-1084203 Capsella rubella
Carub.0006s0297 1.0kb upstream 1.0kb upstream 4509 true scaffold_6: 1079195-1083703 Capsella rubella
Carub.0006s0297 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1079195-1080194 Capsella rubella
Carub.0006s0297 1.0kb downstream 1.0kb downstream 4509 true scaffold_6: 1080195-1084703 Capsella rubella
Carub.0006s0297 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1083704-1084703 Capsella rubella
Carub.0006s0297 2.0kb upstream 2.0kb upstream 5509 true scaffold_6: 1078195-1083703 Capsella rubella
Carub.0006s0297 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1078195-1080194 Capsella rubella
Carub.0006s0297 2.0kb downstream 2.0kb downstream 5509 true scaffold_6: 1080195-1085703 Capsella rubella
Carub.0006s0297 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1083704-1085703 Capsella rubella
Carub.0006s0297 5.0kb upstream 5.0kb upstream 8509 true scaffold_6: 1075195-1083703 Capsella rubella
Carub.0006s0297 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1075195-1080194 Capsella rubella
Carub.0006s0297 5.0kb downstream 5.0kb downstream 8509 true scaffold_6: 1080195-1088703 Capsella rubella
Carub.0006s0297 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1083704-1088703 Capsella rubella
Carub.0006s0297 10.0kb upstream 10.0kb upstream 13509 true scaffold_6: 1070195-1083703 Capsella rubella
Carub.0006s0297 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1070195-1080194 Capsella rubella
Carub.0006s0297 10.0kb downstream 10.0kb downstream 13509 true scaffold_6: 1080195-1093703 Capsella rubella
Carub.0006s0297 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1083704-1093703 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360765 5261 Brassicaceae View MSA
123830631 5264 Brassicales-Malvales View MSA
124343533 5266 SBM View MSA
124237785 5268 Malvidae View MSA
124066433 5270 Rosid View MSA
123736830 5271 Pentapetalae View MSA
122788916 5272 Eudicot View MSA
122044484 5273 Angiosperm View MSA
121347112 5274 Embryophyte View MSA
123426433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain