Gene : Carub.0001s1961 C. rubella v1.1
Defline:  (1 of 2) PTHR10774:SF50 - SYNAPTOTAGMIN-1-RELATED Genomic Order:  1961
Name:  ? Carub.0001s1961 Secondary Identifier:  ? PAC:39230339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1961 0.5kb upstream 0.5kb upstream 3403 true scaffold_1: 6999529-7002931 Capsella rubella
Carub.0001s1961 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6999529-7000028 Capsella rubella
Carub.0001s1961 0.5kb downstream 0.5kb downstream 3403 true scaffold_1: 7000029-7003431 Capsella rubella
Carub.0001s1961 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7002932-7003431 Capsella rubella
Carub.0001s1961 1.0kb upstream 1.0kb upstream 3903 true scaffold_1: 6999029-7002931 Capsella rubella
Carub.0001s1961 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6999029-7000028 Capsella rubella
Carub.0001s1961 1.0kb downstream 1.0kb downstream 3903 true scaffold_1: 7000029-7003931 Capsella rubella
Carub.0001s1961 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7002932-7003931 Capsella rubella
Carub.0001s1961 2.0kb upstream 2.0kb upstream 4903 true scaffold_1: 6998029-7002931 Capsella rubella
Carub.0001s1961 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6998029-7000028 Capsella rubella
Carub.0001s1961 2.0kb downstream 2.0kb downstream 4903 true scaffold_1: 7000029-7004931 Capsella rubella
Carub.0001s1961 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7002932-7004931 Capsella rubella
Carub.0001s1961 5.0kb upstream 5.0kb upstream 7903 true scaffold_1: 6995029-7002931 Capsella rubella
Carub.0001s1961 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6995029-7000028 Capsella rubella
Carub.0001s1961 5.0kb downstream 5.0kb downstream 7903 true scaffold_1: 7000029-7007931 Capsella rubella
Carub.0001s1961 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7002932-7007931 Capsella rubella
Carub.0001s1961 10.0kb upstream 10.0kb upstream 12903 true scaffold_1: 6990029-7002931 Capsella rubella
Carub.0001s1961 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6990029-7000028 Capsella rubella
Carub.0001s1961 10.0kb downstream 10.0kb downstream 12903 true scaffold_1: 7000029-7012931 Capsella rubella
Carub.0001s1961 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7002932-7012931 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363678 5261 Brassicaceae View MSA
123831259 5264 Brassicales-Malvales View MSA
124350150 5266 SBM View MSA
124237503 5268 Malvidae View MSA
124069636 5270 Rosid View MSA
123744925 5271 Pentapetalae View MSA
122791810 5272 Eudicot View MSA
122043926 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346982 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain