Gene : Carub.0001s1543 C. rubella v1.1
Defline:  (1 of 4) PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1543
Name:  ? Carub.0001s1543 Secondary Identifier:  ? PAC:39227158
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1543 0.5kb upstream 0.5kb upstream 1219 true scaffold_1: 5447028-5448246 Capsella rubella
Carub.0001s1543 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5447028-5447527 Capsella rubella
Carub.0001s1543 0.5kb downstream 0.5kb downstream 1219 true scaffold_1: 5447528-5448746 Capsella rubella
Carub.0001s1543 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5448247-5448746 Capsella rubella
Carub.0001s1543 1.0kb upstream 1.0kb upstream 1719 true scaffold_1: 5446528-5448246 Capsella rubella
Carub.0001s1543 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5446528-5447527 Capsella rubella
Carub.0001s1543 1.0kb downstream 1.0kb downstream 1719 true scaffold_1: 5447528-5449246 Capsella rubella
Carub.0001s1543 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5448247-5449246 Capsella rubella
Carub.0001s1543 2.0kb upstream 2.0kb upstream 2719 true scaffold_1: 5445528-5448246 Capsella rubella
Carub.0001s1543 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5445528-5447527 Capsella rubella
Carub.0001s1543 2.0kb downstream 2.0kb downstream 2719 true scaffold_1: 5447528-5450246 Capsella rubella
Carub.0001s1543 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5448247-5450246 Capsella rubella
Carub.0001s1543 5.0kb upstream 5.0kb upstream 5719 true scaffold_1: 5442528-5448246 Capsella rubella
Carub.0001s1543 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5442528-5447527 Capsella rubella
Carub.0001s1543 5.0kb downstream 5.0kb downstream 5719 true scaffold_1: 5447528-5453246 Capsella rubella
Carub.0001s1543 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5448247-5453246 Capsella rubella
Carub.0001s1543 10.0kb upstream 10.0kb upstream 10719 true scaffold_1: 5437528-5448246 Capsella rubella
Carub.0001s1543 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5437528-5447527 Capsella rubella
Carub.0001s1543 10.0kb downstream 10.0kb downstream 10719 true scaffold_1: 5447528-5458246 Capsella rubella
Carub.0001s1543 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5448247-5458246 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781833 5273 Angiosperm View MSA
122381115 5261 Brassicaceae View MSA
123803062 5264 Brassicales-Malvales View MSA
124300199 5266 SBM View MSA
124151438 5268 Malvidae View MSA
123876869 5270 Rosid View MSA
123750713 5271 Pentapetalae View MSA
122773813 5272 Eudicot View MSA
121053394 5274 Embryophyte View MSA
123093417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain