Gene : Carub.0001s1685 C. rubella v1.1
Defline:  (1 of 1) PTHR11785:SF273 - CATIONIC AMINO ACID TRANSPORTER 8, VACUOLAR Genomic Order:  1685
Name:  ? Carub.0001s1685 Secondary Identifier:  ? PAC:39227446
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1685 0.5kb upstream 0.5kb upstream 2421 true scaffold_1: 5905276-5907696 Capsella rubella
Carub.0001s1685 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5905276-5905775 Capsella rubella
Carub.0001s1685 0.5kb downstream 0.5kb downstream 2421 true scaffold_1: 5905776-5908196 Capsella rubella
Carub.0001s1685 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5907697-5908196 Capsella rubella
Carub.0001s1685 1.0kb upstream 1.0kb upstream 2921 true scaffold_1: 5904776-5907696 Capsella rubella
Carub.0001s1685 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5904776-5905775 Capsella rubella
Carub.0001s1685 1.0kb downstream 1.0kb downstream 2921 true scaffold_1: 5905776-5908696 Capsella rubella
Carub.0001s1685 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5907697-5908696 Capsella rubella
Carub.0001s1685 2.0kb upstream 2.0kb upstream 3921 true scaffold_1: 5903776-5907696 Capsella rubella
Carub.0001s1685 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5903776-5905775 Capsella rubella
Carub.0001s1685 2.0kb downstream 2.0kb downstream 3921 true scaffold_1: 5905776-5909696 Capsella rubella
Carub.0001s1685 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5907697-5909696 Capsella rubella
Carub.0001s1685 5.0kb upstream 5.0kb upstream 6921 true scaffold_1: 5900776-5907696 Capsella rubella
Carub.0001s1685 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5900776-5905775 Capsella rubella
Carub.0001s1685 5.0kb downstream 5.0kb downstream 6921 true scaffold_1: 5905776-5912696 Capsella rubella
Carub.0001s1685 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5907697-5912696 Capsella rubella
Carub.0001s1685 10.0kb upstream 10.0kb upstream 11921 true scaffold_1: 5895776-5907696 Capsella rubella
Carub.0001s1685 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5895776-5905775 Capsella rubella
Carub.0001s1685 10.0kb downstream 10.0kb downstream 11921 true scaffold_1: 5905776-5917696 Capsella rubella
Carub.0001s1685 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5907697-5917696 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372252 5261 Brassicaceae View MSA
123832066 5264 Brassicales-Malvales View MSA
124321773 5266 SBM View MSA
124247365 5268 Malvidae View MSA
124065749 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain