Gene : Carub.0001s1299 C. rubella v1.1
Defline:  (1 of 5) K09287 - RAV-like factor (RAV) Genomic Order:  1299
Name:  ? Carub.0001s1299 Secondary Identifier:  ? PAC:39230597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1299 0.5kb upstream 0.5kb upstream 1724 true scaffold_1: 4642981-4644704 Capsella rubella
Carub.0001s1299 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4642981-4643480 Capsella rubella
Carub.0001s1299 0.5kb downstream 0.5kb downstream 1724 true scaffold_1: 4643481-4645204 Capsella rubella
Carub.0001s1299 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4644705-4645204 Capsella rubella
Carub.0001s1299 1.0kb upstream 1.0kb upstream 2224 true scaffold_1: 4642481-4644704 Capsella rubella
Carub.0001s1299 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4642481-4643480 Capsella rubella
Carub.0001s1299 1.0kb downstream 1.0kb downstream 2224 true scaffold_1: 4643481-4645704 Capsella rubella
Carub.0001s1299 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4644705-4645704 Capsella rubella
Carub.0001s1299 2.0kb upstream 2.0kb upstream 3224 true scaffold_1: 4641481-4644704 Capsella rubella
Carub.0001s1299 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4641481-4643480 Capsella rubella
Carub.0001s1299 2.0kb downstream 2.0kb downstream 3224 true scaffold_1: 4643481-4646704 Capsella rubella
Carub.0001s1299 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4644705-4646704 Capsella rubella
Carub.0001s1299 5.0kb upstream 5.0kb upstream 6224 true scaffold_1: 4638481-4644704 Capsella rubella
Carub.0001s1299 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4638481-4643480 Capsella rubella
Carub.0001s1299 5.0kb downstream 5.0kb downstream 6224 true scaffold_1: 4643481-4649704 Capsella rubella
Carub.0001s1299 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4644705-4649704 Capsella rubella
Carub.0001s1299 10.0kb upstream 10.0kb upstream 11224 true scaffold_1: 4633481-4644704 Capsella rubella
Carub.0001s1299 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4633481-4643480 Capsella rubella
Carub.0001s1299 10.0kb downstream 10.0kb downstream 11224 true scaffold_1: 4643481-4654704 Capsella rubella
Carub.0001s1299 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4644705-4654704 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373736 5261 Brassicaceae View MSA
123837249 5264 Brassicales-Malvales View MSA
124346726 5266 SBM View MSA
124243477 5268 Malvidae View MSA
124062734 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain