Gene : Carub.0001s1316 C. rubella v1.1

Defline:  (1 of 3) PTHR10257//PTHR10257:SF26 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B // SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM Genomic Order:  1316
Name:  ? Carub.0001s1316 Secondary Identifier:  ? PAC:39229640

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1316 0.5kb upstream 0.5kb upstream 3141 true scaffold_1: 4710350-4713490 Capsella rubella
Carub.0001s1316 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4710350-4710849 Capsella rubella
Carub.0001s1316 0.5kb downstream 0.5kb downstream 3141 true scaffold_1: 4710850-4713990 Capsella rubella
Carub.0001s1316 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4713491-4713990 Capsella rubella
Carub.0001s1316 1.0kb upstream 1.0kb upstream 3641 true scaffold_1: 4709850-4713490 Capsella rubella
Carub.0001s1316 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4709850-4710849 Capsella rubella
Carub.0001s1316 1.0kb downstream 1.0kb downstream 3641 true scaffold_1: 4710850-4714490 Capsella rubella
Carub.0001s1316 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4713491-4714490 Capsella rubella
Carub.0001s1316 2.0kb upstream 2.0kb upstream 4641 true scaffold_1: 4708850-4713490 Capsella rubella
Carub.0001s1316 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4708850-4710849 Capsella rubella
Carub.0001s1316 2.0kb downstream 2.0kb downstream 4641 true scaffold_1: 4710850-4715490 Capsella rubella
Carub.0001s1316 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4713491-4715490 Capsella rubella
Carub.0001s1316 5.0kb upstream 5.0kb upstream 7641 true scaffold_1: 4705850-4713490 Capsella rubella
Carub.0001s1316 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4705850-4710849 Capsella rubella
Carub.0001s1316 5.0kb downstream 5.0kb downstream 7641 true scaffold_1: 4710850-4718490 Capsella rubella
Carub.0001s1316 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4713491-4718490 Capsella rubella
Carub.0001s1316 10.0kb upstream 10.0kb upstream 12641 true scaffold_1: 4700850-4713490 Capsella rubella
Carub.0001s1316 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4700850-4710849 Capsella rubella
Carub.0001s1316 10.0kb downstream 10.0kb downstream 12641 true scaffold_1: 4710850-4723490 Capsella rubella
Carub.0001s1316 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4713491-4723490 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361218 5261 Brassicaceae View MSA
123836644 5264 Brassicales-Malvales View MSA
124345623 5266 SBM View MSA
124246599 5268 Malvidae View MSA
124065822 5270 Rosid View MSA
123746976 5271 Pentapetalae View MSA
122787217 5272 Eudicot View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain