Gene : Carub.0001s1337 C. rubella v1.1
Defline:  (1 of 3) PTHR15245//PTHR15245:SF11 - SYMPLEKIN-RELATED // PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  1337
Name:  ? Carub.0001s1337 Secondary Identifier:  ? PAC:39231346
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6351 Capsella rubella pathologic  
Crubella PWY-6352 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1337 0.5kb upstream 0.5kb upstream 3201 true scaffold_1: 4764785-4767985 Capsella rubella
Carub.0001s1337 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4767486-4767985 Capsella rubella
Carub.0001s1337 0.5kb downstream 0.5kb downstream 3201 true scaffold_1: 4764285-4767485 Capsella rubella
Carub.0001s1337 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4764285-4764784 Capsella rubella
Carub.0001s1337 1.0kb upstream 1.0kb upstream 3701 true scaffold_1: 4764785-4768485 Capsella rubella
Carub.0001s1337 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4767486-4768485 Capsella rubella
Carub.0001s1337 1.0kb downstream 1.0kb downstream 3701 true scaffold_1: 4763785-4767485 Capsella rubella
Carub.0001s1337 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4763785-4764784 Capsella rubella
Carub.0001s1337 2.0kb upstream 2.0kb upstream 4701 true scaffold_1: 4764785-4769485 Capsella rubella
Carub.0001s1337 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4767486-4769485 Capsella rubella
Carub.0001s1337 2.0kb downstream 2.0kb downstream 4701 true scaffold_1: 4762785-4767485 Capsella rubella
Carub.0001s1337 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4762785-4764784 Capsella rubella
Carub.0001s1337 5.0kb upstream 5.0kb upstream 7701 true scaffold_1: 4764785-4772485 Capsella rubella
Carub.0001s1337 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4767486-4772485 Capsella rubella
Carub.0001s1337 5.0kb downstream 5.0kb downstream 7701 true scaffold_1: 4759785-4767485 Capsella rubella
Carub.0001s1337 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4759785-4764784 Capsella rubella
Carub.0001s1337 10.0kb upstream 10.0kb upstream 12701 true scaffold_1: 4764785-4777485 Capsella rubella
Carub.0001s1337 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4767486-4777485 Capsella rubella
Carub.0001s1337 10.0kb downstream 10.0kb downstream 12701 true scaffold_1: 4754785-4767485 Capsella rubella
Carub.0001s1337 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4754785-4764784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377258 5261 Brassicaceae View MSA
123801484 5264 Brassicales-Malvales View MSA
124298782 5266 SBM View MSA
124150347 5268 Malvidae View MSA
123875977 5270 Rosid View MSA
123459718 5271 Pentapetalae View MSA
122495107 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain