Gene : Carub.0001s1348 C. rubella v1.1
Defline:  (1 of 4) PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  1348
Name:  ? Carub.0001s1348 Secondary Identifier:  ? PAC:39230264
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1348 0.5kb upstream 0.5kb upstream 2138 true scaffold_1: 4804030-4806167 Capsella rubella
Carub.0001s1348 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4804030-4804529 Capsella rubella
Carub.0001s1348 0.5kb downstream 0.5kb downstream 2138 true scaffold_1: 4804530-4806667 Capsella rubella
Carub.0001s1348 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4806168-4806667 Capsella rubella
Carub.0001s1348 1.0kb upstream 1.0kb upstream 2638 true scaffold_1: 4803530-4806167 Capsella rubella
Carub.0001s1348 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4803530-4804529 Capsella rubella
Carub.0001s1348 1.0kb downstream 1.0kb downstream 2638 true scaffold_1: 4804530-4807167 Capsella rubella
Carub.0001s1348 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4806168-4807167 Capsella rubella
Carub.0001s1348 2.0kb upstream 2.0kb upstream 3638 true scaffold_1: 4802530-4806167 Capsella rubella
Carub.0001s1348 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4802530-4804529 Capsella rubella
Carub.0001s1348 2.0kb downstream 2.0kb downstream 3638 true scaffold_1: 4804530-4808167 Capsella rubella
Carub.0001s1348 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4806168-4808167 Capsella rubella
Carub.0001s1348 5.0kb upstream 5.0kb upstream 6638 true scaffold_1: 4799530-4806167 Capsella rubella
Carub.0001s1348 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4799530-4804529 Capsella rubella
Carub.0001s1348 5.0kb downstream 5.0kb downstream 6638 true scaffold_1: 4804530-4811167 Capsella rubella
Carub.0001s1348 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4806168-4811167 Capsella rubella
Carub.0001s1348 10.0kb upstream 10.0kb upstream 11638 true scaffold_1: 4794530-4806167 Capsella rubella
Carub.0001s1348 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4794530-4804529 Capsella rubella
Carub.0001s1348 10.0kb downstream 10.0kb downstream 11638 true scaffold_1: 4804530-4816167 Capsella rubella
Carub.0001s1348 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4806168-4816167 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370751 5261 Brassicaceae View MSA
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain