Gene : Carub.0001s1173 C. rubella v1.1
Defline:  (1 of 1) 3.7.1.2 - Fumarylacetoacetase / Fumarylacetoacetate hydrolase Genomic Order:  1173
Name:  ? Carub.0001s1173 Secondary Identifier:  ? PAC:39230107
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TYRFUMCAT-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1173 0.5kb upstream 0.5kb upstream 3793 true scaffold_1: 4168464-4172256 Capsella rubella
Carub.0001s1173 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4168464-4168963 Capsella rubella
Carub.0001s1173 0.5kb downstream 0.5kb downstream 3793 true scaffold_1: 4168964-4172756 Capsella rubella
Carub.0001s1173 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4172257-4172756 Capsella rubella
Carub.0001s1173 1.0kb upstream 1.0kb upstream 4293 true scaffold_1: 4167964-4172256 Capsella rubella
Carub.0001s1173 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4167964-4168963 Capsella rubella
Carub.0001s1173 1.0kb downstream 1.0kb downstream 4293 true scaffold_1: 4168964-4173256 Capsella rubella
Carub.0001s1173 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4172257-4173256 Capsella rubella
Carub.0001s1173 2.0kb upstream 2.0kb upstream 5293 true scaffold_1: 4166964-4172256 Capsella rubella
Carub.0001s1173 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4166964-4168963 Capsella rubella
Carub.0001s1173 2.0kb downstream 2.0kb downstream 5293 true scaffold_1: 4168964-4174256 Capsella rubella
Carub.0001s1173 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4172257-4174256 Capsella rubella
Carub.0001s1173 5.0kb upstream 5.0kb upstream 8293 true scaffold_1: 4163964-4172256 Capsella rubella
Carub.0001s1173 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4163964-4168963 Capsella rubella
Carub.0001s1173 5.0kb downstream 5.0kb downstream 8293 true scaffold_1: 4168964-4177256 Capsella rubella
Carub.0001s1173 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4172257-4177256 Capsella rubella
Carub.0001s1173 10.0kb upstream 10.0kb upstream 13293 true scaffold_1: 4158964-4172256 Capsella rubella
Carub.0001s1173 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4158964-4168963 Capsella rubella
Carub.0001s1173 10.0kb downstream 10.0kb downstream 13293 true scaffold_1: 4168964-4182256 Capsella rubella
Carub.0001s1173 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4172257-4182256 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364829 5261 Brassicaceae View MSA
123835916 5264 Brassicales-Malvales View MSA
124338618 5266 SBM View MSA
124237542 5268 Malvidae View MSA
124064867 5270 Rosid View MSA
123751492 5271 Pentapetalae View MSA
122792638 5272 Eudicot View MSA
122047846 5273 Angiosperm View MSA
121345378 5274 Embryophyte View MSA
123424043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain