Gene : Carub.0001s1156 C. rubella v1.1
Defline:  (1 of 414) PF13041 - PPR repeat family (PPR_2) Genomic Order:  1156
Name:  ? Carub.0001s1156 Secondary Identifier:  ? PAC:39231178
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1156 0.5kb upstream 0.5kb upstream 2146 true scaffold_1: 4109659-4111804 Capsella rubella
Carub.0001s1156 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4111305-4111804 Capsella rubella
Carub.0001s1156 0.5kb downstream 0.5kb downstream 2146 true scaffold_1: 4109159-4111304 Capsella rubella
Carub.0001s1156 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4109159-4109658 Capsella rubella
Carub.0001s1156 1.0kb upstream 1.0kb upstream 2646 true scaffold_1: 4109659-4112304 Capsella rubella
Carub.0001s1156 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4111305-4112304 Capsella rubella
Carub.0001s1156 1.0kb downstream 1.0kb downstream 2646 true scaffold_1: 4108659-4111304 Capsella rubella
Carub.0001s1156 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4108659-4109658 Capsella rubella
Carub.0001s1156 2.0kb upstream 2.0kb upstream 3646 true scaffold_1: 4109659-4113304 Capsella rubella
Carub.0001s1156 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4111305-4113304 Capsella rubella
Carub.0001s1156 2.0kb downstream 2.0kb downstream 3646 true scaffold_1: 4107659-4111304 Capsella rubella
Carub.0001s1156 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4107659-4109658 Capsella rubella
Carub.0001s1156 5.0kb upstream 5.0kb upstream 6646 true scaffold_1: 4109659-4116304 Capsella rubella
Carub.0001s1156 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4111305-4116304 Capsella rubella
Carub.0001s1156 5.0kb downstream 5.0kb downstream 6646 true scaffold_1: 4104659-4111304 Capsella rubella
Carub.0001s1156 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4104659-4109658 Capsella rubella
Carub.0001s1156 10.0kb upstream 10.0kb upstream 11646 true scaffold_1: 4109659-4121304 Capsella rubella
Carub.0001s1156 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4111305-4121304 Capsella rubella
Carub.0001s1156 10.0kb downstream 10.0kb downstream 11646 true scaffold_1: 4099659-4111304 Capsella rubella
Carub.0001s1156 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4099659-4109658 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362412 5261 Brassicaceae View MSA
123836276 5264 Brassicales-Malvales View MSA
124337804 5266 SBM View MSA
124241284 5268 Malvidae View MSA
124064756 5270 Rosid View MSA
123739873 5271 Pentapetalae View MSA
122787306 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain