Gene : Carub.0001s1008 C. rubella v1.1
Defline:  (1 of 1) PTHR31945//PTHR31945:SF14 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH90 Genomic Order:  1008
Name:  ? Carub.0001s1008 Secondary Identifier:  ? PAC:39226999
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1008 0.5kb upstream 0.5kb upstream 3092 true scaffold_1: 3597818-3600909 Capsella rubella
Carub.0001s1008 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3597818-3598317 Capsella rubella
Carub.0001s1008 0.5kb downstream 0.5kb downstream 3092 true scaffold_1: 3598318-3601409 Capsella rubella
Carub.0001s1008 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3600910-3601409 Capsella rubella
Carub.0001s1008 1.0kb upstream 1.0kb upstream 3592 true scaffold_1: 3597318-3600909 Capsella rubella
Carub.0001s1008 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3597318-3598317 Capsella rubella
Carub.0001s1008 1.0kb downstream 1.0kb downstream 3592 true scaffold_1: 3598318-3601909 Capsella rubella
Carub.0001s1008 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3600910-3601909 Capsella rubella
Carub.0001s1008 2.0kb upstream 2.0kb upstream 4592 true scaffold_1: 3596318-3600909 Capsella rubella
Carub.0001s1008 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3596318-3598317 Capsella rubella
Carub.0001s1008 2.0kb downstream 2.0kb downstream 4592 true scaffold_1: 3598318-3602909 Capsella rubella
Carub.0001s1008 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3600910-3602909 Capsella rubella
Carub.0001s1008 5.0kb upstream 5.0kb upstream 7592 true scaffold_1: 3593318-3600909 Capsella rubella
Carub.0001s1008 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3593318-3598317 Capsella rubella
Carub.0001s1008 5.0kb downstream 5.0kb downstream 7592 true scaffold_1: 3598318-3605909 Capsella rubella
Carub.0001s1008 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3600910-3605909 Capsella rubella
Carub.0001s1008 10.0kb upstream 10.0kb upstream 12592 true scaffold_1: 3588318-3600909 Capsella rubella
Carub.0001s1008 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3588318-3598317 Capsella rubella
Carub.0001s1008 10.0kb downstream 10.0kb downstream 12592 true scaffold_1: 3598318-3610909 Capsella rubella
Carub.0001s1008 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3600910-3610909 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041355 5273 Angiosperm View MSA
122367481 5261 Brassicaceae View MSA
123836476 5264 Brassicales-Malvales View MSA
124343779 5266 SBM View MSA
124244260 5268 Malvidae View MSA
124063868 5270 Rosid View MSA
123741521 5271 Pentapetalae View MSA
122795630 5272 Eudicot View MSA
121343945 5274 Embryophyte View MSA
123379944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain