Gene : Carub.0001s0816 C. rubella v1.1
Defline:  (1 of 1) PTHR10809//PTHR10809:SF59 - VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN // VESICLE-ASSOCIATED PROTEIN 2-2 Genomic Order:  816
Name:  ? Carub.0001s0816 Secondary Identifier:  ? PAC:39229335
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0816 0.5kb upstream 0.5kb upstream 4498 true scaffold_1: 2899617-2904114 Capsella rubella
Carub.0001s0816 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2903615-2904114 Capsella rubella
Carub.0001s0816 0.5kb downstream 0.5kb downstream 4498 true scaffold_1: 2899117-2903614 Capsella rubella
Carub.0001s0816 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2899117-2899616 Capsella rubella
Carub.0001s0816 1.0kb upstream 1.0kb upstream 4998 true scaffold_1: 2899617-2904614 Capsella rubella
Carub.0001s0816 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2903615-2904614 Capsella rubella
Carub.0001s0816 1.0kb downstream 1.0kb downstream 4998 true scaffold_1: 2898617-2903614 Capsella rubella
Carub.0001s0816 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2898617-2899616 Capsella rubella
Carub.0001s0816 2.0kb upstream 2.0kb upstream 5998 true scaffold_1: 2899617-2905614 Capsella rubella
Carub.0001s0816 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2903615-2905614 Capsella rubella
Carub.0001s0816 2.0kb downstream 2.0kb downstream 5998 true scaffold_1: 2897617-2903614 Capsella rubella
Carub.0001s0816 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2897617-2899616 Capsella rubella
Carub.0001s0816 5.0kb upstream 5.0kb upstream 8998 true scaffold_1: 2899617-2908614 Capsella rubella
Carub.0001s0816 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2903615-2908614 Capsella rubella
Carub.0001s0816 5.0kb downstream 5.0kb downstream 8998 true scaffold_1: 2894617-2903614 Capsella rubella
Carub.0001s0816 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2894617-2899616 Capsella rubella
Carub.0001s0816 10.0kb upstream 10.0kb upstream 13998 true scaffold_1: 2899617-2913614 Capsella rubella
Carub.0001s0816 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2903615-2913614 Capsella rubella
Carub.0001s0816 10.0kb downstream 10.0kb downstream 13998 true scaffold_1: 2889617-2903614 Capsella rubella
Carub.0001s0816 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2889617-2899616 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380438 5261 Brassicaceae View MSA
123829171 5264 Brassicales-Malvales View MSA
124345755 5266 SBM View MSA
124251569 5268 Malvidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain