Gene : Carub.0001s0883 C. rubella v1.1
Defline:  (1 of 5) PTHR10366:SF362 - ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  883
Name:  ? Carub.0001s0883 Secondary Identifier:  ? PAC:39228254
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-361 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0883 0.5kb upstream 0.5kb upstream 2604 true scaffold_1: 3136650-3139253 Capsella rubella
Carub.0001s0883 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3136650-3137149 Capsella rubella
Carub.0001s0883 0.5kb downstream 0.5kb downstream 2604 true scaffold_1: 3137150-3139753 Capsella rubella
Carub.0001s0883 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3139254-3139753 Capsella rubella
Carub.0001s0883 1.0kb upstream 1.0kb upstream 3104 true scaffold_1: 3136150-3139253 Capsella rubella
Carub.0001s0883 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3136150-3137149 Capsella rubella
Carub.0001s0883 1.0kb downstream 1.0kb downstream 3104 true scaffold_1: 3137150-3140253 Capsella rubella
Carub.0001s0883 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3139254-3140253 Capsella rubella
Carub.0001s0883 2.0kb upstream 2.0kb upstream 4104 true scaffold_1: 3135150-3139253 Capsella rubella
Carub.0001s0883 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3135150-3137149 Capsella rubella
Carub.0001s0883 2.0kb downstream 2.0kb downstream 4104 true scaffold_1: 3137150-3141253 Capsella rubella
Carub.0001s0883 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3139254-3141253 Capsella rubella
Carub.0001s0883 5.0kb upstream 5.0kb upstream 7104 true scaffold_1: 3132150-3139253 Capsella rubella
Carub.0001s0883 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3132150-3137149 Capsella rubella
Carub.0001s0883 5.0kb downstream 5.0kb downstream 7104 true scaffold_1: 3137150-3144253 Capsella rubella
Carub.0001s0883 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3139254-3144253 Capsella rubella
Carub.0001s0883 10.0kb upstream 10.0kb upstream 12104 true scaffold_1: 3127150-3139253 Capsella rubella
Carub.0001s0883 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3127150-3137149 Capsella rubella
Carub.0001s0883 10.0kb downstream 10.0kb downstream 12104 true scaffold_1: 3137150-3149253 Capsella rubella
Carub.0001s0883 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3139254-3149253 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510262 5273 Angiosperm View MSA
122361344 5261 Brassicaceae View MSA
123798141 5264 Brassicales-Malvales View MSA
124295816 5266 SBM View MSA
124148149 5268 Malvidae View MSA
123874205 5270 Rosid View MSA
123458212 5271 Pentapetalae View MSA
122493621 5272 Eudicot View MSA
120783368 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain