Gene : Carub.0001s0958 C. rubella v1.1
Defline:  (1 of 2) K12236 - transcriptional repressor NF-X1 [EC:6.3.2.-] (NFX1) Genomic Order:  958
Name:  ? Carub.0001s0958 Secondary Identifier:  ? PAC:39228896
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0958 0.5kb upstream 0.5kb upstream 4815 true scaffold_1: 3418109-3422923 Capsella rubella
Carub.0001s0958 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3422424-3422923 Capsella rubella
Carub.0001s0958 0.5kb downstream 0.5kb downstream 4815 true scaffold_1: 3417609-3422423 Capsella rubella
Carub.0001s0958 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3417609-3418108 Capsella rubella
Carub.0001s0958 1.0kb upstream 1.0kb upstream 5315 true scaffold_1: 3418109-3423423 Capsella rubella
Carub.0001s0958 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3422424-3423423 Capsella rubella
Carub.0001s0958 1.0kb downstream 1.0kb downstream 5315 true scaffold_1: 3417109-3422423 Capsella rubella
Carub.0001s0958 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3417109-3418108 Capsella rubella
Carub.0001s0958 2.0kb upstream 2.0kb upstream 6315 true scaffold_1: 3418109-3424423 Capsella rubella
Carub.0001s0958 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3422424-3424423 Capsella rubella
Carub.0001s0958 2.0kb downstream 2.0kb downstream 6315 true scaffold_1: 3416109-3422423 Capsella rubella
Carub.0001s0958 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3416109-3418108 Capsella rubella
Carub.0001s0958 5.0kb upstream 5.0kb upstream 9315 true scaffold_1: 3418109-3427423 Capsella rubella
Carub.0001s0958 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3422424-3427423 Capsella rubella
Carub.0001s0958 5.0kb downstream 5.0kb downstream 9315 true scaffold_1: 3413109-3422423 Capsella rubella
Carub.0001s0958 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3413109-3418108 Capsella rubella
Carub.0001s0958 10.0kb upstream 10.0kb upstream 14315 true scaffold_1: 3418109-3432423 Capsella rubella
Carub.0001s0958 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3422424-3432423 Capsella rubella
Carub.0001s0958 10.0kb downstream 10.0kb downstream 14315 true scaffold_1: 3408109-3422423 Capsella rubella
Carub.0001s0958 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3408109-3418108 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361610 5261 Brassicaceae View MSA
123838331 5264 Brassicales-Malvales View MSA
124344883 5266 SBM View MSA
124243488 5268 Malvidae View MSA
124066293 5270 Rosid View MSA
123738886 5271 Pentapetalae View MSA
122791212 5272 Eudicot View MSA
122048079 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121345908 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain