Gene : Carub.0001s0780 C. rubella v1.1
Defline:  (1 of 1) PTHR11073//PTHR11073:SF6 - CALRETICULIN AND CALNEXIN // CALRETICULIN-3 Genomic Order:  780
Name:  ? Carub.0001s0780 Secondary Identifier:  ? PAC:39229185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0780 0.5kb upstream 0.5kb upstream 4503 true scaffold_1: 2746179-2750681 Capsella rubella
Carub.0001s0780 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2750182-2750681 Capsella rubella
Carub.0001s0780 0.5kb downstream 0.5kb downstream 4503 true scaffold_1: 2745679-2750181 Capsella rubella
Carub.0001s0780 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2745679-2746178 Capsella rubella
Carub.0001s0780 1.0kb upstream 1.0kb upstream 5003 true scaffold_1: 2746179-2751181 Capsella rubella
Carub.0001s0780 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2750182-2751181 Capsella rubella
Carub.0001s0780 1.0kb downstream 1.0kb downstream 5003 true scaffold_1: 2745179-2750181 Capsella rubella
Carub.0001s0780 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2745179-2746178 Capsella rubella
Carub.0001s0780 2.0kb upstream 2.0kb upstream 6003 true scaffold_1: 2746179-2752181 Capsella rubella
Carub.0001s0780 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2750182-2752181 Capsella rubella
Carub.0001s0780 2.0kb downstream 2.0kb downstream 6003 true scaffold_1: 2744179-2750181 Capsella rubella
Carub.0001s0780 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2744179-2746178 Capsella rubella
Carub.0001s0780 5.0kb upstream 5.0kb upstream 9003 true scaffold_1: 2746179-2755181 Capsella rubella
Carub.0001s0780 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2750182-2755181 Capsella rubella
Carub.0001s0780 5.0kb downstream 5.0kb downstream 9003 true scaffold_1: 2741179-2750181 Capsella rubella
Carub.0001s0780 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2741179-2746178 Capsella rubella
Carub.0001s0780 10.0kb upstream 10.0kb upstream 14003 true scaffold_1: 2746179-2760181 Capsella rubella
Carub.0001s0780 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2750182-2760181 Capsella rubella
Carub.0001s0780 10.0kb downstream 10.0kb downstream 14003 true scaffold_1: 2736179-2750181 Capsella rubella
Carub.0001s0780 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2736179-2746178 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378514 5261 Brassicaceae View MSA
123834511 5264 Brassicales-Malvales View MSA
124336734 5266 SBM View MSA
124248219 5268 Malvidae View MSA
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain