Protein : Carub.0001s0790.1.p C. rubella v1.1
UniProt Accession:  ? R0IC61 Secondary Identifier:  PAC:39227532
Organism Name:  Capsella rubella Length:  571  
Name:  Carub.0001s0790.1.p
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Proteins

9 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR014284 Domain RNA polymerase sigma-70 like domain
IPR013324 Domain RNA polymerase sigma factor, region 3/4
IPR013325 Domain RNA polymerase sigma factor, region 2
IPR007627 Domain RNA polymerase sigma-70 region 2
IPR007630 Domain RNA polymerase sigma-70 region 4
IPR000943 Domain RNA polymerase sigma-70
IPR007624 Domain RNA polymerase sigma-70 region 3
IPR016262 Family RNA polymerase sigma factor, SigB/C/D/F, plastid
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0001s0790.1_CDS 1716   scaffold_1: 2784086-2787445 Capsella rubella

27 Ontology Annotations

Ontology Term Db Gene/Protein Name
IPR000943 InterPro Carub.0001s0790.1.p
IPR007624 InterPro Carub.0001s0790.1.p
GO:0003700 GO Carub.0001s0790.1.p
GO:0006352 GO Carub.0001s0790.1.p
GO:0006355 GO Carub.0001s0790.1.p
GO:0016987 GO Carub.0001s0790.1.p
IPR011991 InterPro Carub.0001s0790.1.p
IPR013324 InterPro Carub.0001s0790.1.p
IPR007627 InterPro Carub.0001s0790.1.p
IPR007630 InterPro Carub.0001s0790.1.p
IPR016262 InterPro Carub.0001s0790.1.p
PTHR30603 PANTHER Carub.0001s0790.1.p
PTHR30603:SF25 PANTHER Carub.0001s0790.1.p
PF04539 PFAM Carub.0001s0790.1.p
IPR013325 InterPro Carub.0001s0790.1.p
IPR014284 InterPro Carub.0001s0790.1.p
SSF88659 SSF Carub.0001s0790.1.p
SSF88946 SSF Carub.0001s0790.1.p
TIGR02937 TIGRFAMs Carub.0001s0790.1.p
PF04542 PFAM Carub.0001s0790.1.p
PF04545 PFAM Carub.0001s0790.1.p
PIRSF000767 PIRSF Carub.0001s0790.1.p
PR00046 PRINTS Carub.0001s0790.1.p
G3DSA:1.10.10.10 GENE3D Carub.0001s0790.1.p
G3DSA:1.10.601.10 GENE3D Carub.0001s0790.1.p
GO:0003677 GO Carub.0001s0790.1.p
R0IC61 UniProt Carub.0001s0790.1.p

0 Pathway Components

0 Pathways