Gene : Carub.0001s0942 C. rubella v1.1
Defline:  (1 of 4) PTHR22950//PTHR22950:SF278 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 1-RELATED Genomic Order:  942
Name:  ? Carub.0001s0942 Secondary Identifier:  ? PAC:39228131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0942 0.5kb upstream 0.5kb upstream 2888 true scaffold_1: 3351730-3354617 Capsella rubella
Carub.0001s0942 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3351730-3352229 Capsella rubella
Carub.0001s0942 0.5kb downstream 0.5kb downstream 2888 true scaffold_1: 3352230-3355117 Capsella rubella
Carub.0001s0942 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3354618-3355117 Capsella rubella
Carub.0001s0942 1.0kb upstream 1.0kb upstream 3388 true scaffold_1: 3351230-3354617 Capsella rubella
Carub.0001s0942 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3351230-3352229 Capsella rubella
Carub.0001s0942 1.0kb downstream 1.0kb downstream 3388 true scaffold_1: 3352230-3355617 Capsella rubella
Carub.0001s0942 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3354618-3355617 Capsella rubella
Carub.0001s0942 2.0kb upstream 2.0kb upstream 4388 true scaffold_1: 3350230-3354617 Capsella rubella
Carub.0001s0942 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3350230-3352229 Capsella rubella
Carub.0001s0942 2.0kb downstream 2.0kb downstream 4388 true scaffold_1: 3352230-3356617 Capsella rubella
Carub.0001s0942 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3354618-3356617 Capsella rubella
Carub.0001s0942 5.0kb upstream 5.0kb upstream 7388 true scaffold_1: 3347230-3354617 Capsella rubella
Carub.0001s0942 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3347230-3352229 Capsella rubella
Carub.0001s0942 5.0kb downstream 5.0kb downstream 7388 true scaffold_1: 3352230-3359617 Capsella rubella
Carub.0001s0942 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3354618-3359617 Capsella rubella
Carub.0001s0942 10.0kb upstream 10.0kb upstream 12388 true scaffold_1: 3342230-3354617 Capsella rubella
Carub.0001s0942 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3342230-3352229 Capsella rubella
Carub.0001s0942 10.0kb downstream 10.0kb downstream 12388 true scaffold_1: 3352230-3364617 Capsella rubella
Carub.0001s0942 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3354618-3364617 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512062 5273 Angiosperm View MSA
122380236 5261 Brassicaceae View MSA
123802614 5264 Brassicales-Malvales View MSA
124299795 5266 SBM View MSA
124151118 5268 Malvidae View MSA
123876622 5270 Rosid View MSA
123460275 5271 Pentapetalae View MSA
122495652 5272 Eudicot View MSA
120785088 5274 Embryophyte View MSA
122826961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain