Gene : Carub.0006s0557 C. rubella v1.1
Defline:  (1 of 1) PTHR10438:SF283 - THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC Genomic Order:  557
Name:  ? Carub.0006s0557 Secondary Identifier:  ? PAC:39249913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0557 0.5kb upstream 0.5kb upstream 1860 true scaffold_6: 2051117-2052976 Capsella rubella
Carub.0006s0557 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2052477-2052976 Capsella rubella
Carub.0006s0557 0.5kb downstream 0.5kb downstream 1860 true scaffold_6: 2050617-2052476 Capsella rubella
Carub.0006s0557 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2050617-2051116 Capsella rubella
Carub.0006s0557 1.0kb upstream 1.0kb upstream 2360 true scaffold_6: 2051117-2053476 Capsella rubella
Carub.0006s0557 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2052477-2053476 Capsella rubella
Carub.0006s0557 1.0kb downstream 1.0kb downstream 2360 true scaffold_6: 2050117-2052476 Capsella rubella
Carub.0006s0557 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2050117-2051116 Capsella rubella
Carub.0006s0557 2.0kb upstream 2.0kb upstream 3360 true scaffold_6: 2051117-2054476 Capsella rubella
Carub.0006s0557 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2052477-2054476 Capsella rubella
Carub.0006s0557 2.0kb downstream 2.0kb downstream 3360 true scaffold_6: 2049117-2052476 Capsella rubella
Carub.0006s0557 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2049117-2051116 Capsella rubella
Carub.0006s0557 5.0kb upstream 5.0kb upstream 6360 true scaffold_6: 2051117-2057476 Capsella rubella
Carub.0006s0557 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2052477-2057476 Capsella rubella
Carub.0006s0557 5.0kb downstream 5.0kb downstream 6360 true scaffold_6: 2046117-2052476 Capsella rubella
Carub.0006s0557 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2046117-2051116 Capsella rubella
Carub.0006s0557 10.0kb upstream 10.0kb upstream 11360 true scaffold_6: 2051117-2062476 Capsella rubella
Carub.0006s0557 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2052477-2062476 Capsella rubella
Carub.0006s0557 10.0kb downstream 10.0kb downstream 11360 true scaffold_6: 2041117-2052476 Capsella rubella
Carub.0006s0557 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2041117-2051116 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360196 5261 Brassicaceae View MSA
123833505 5264 Brassicales-Malvales View MSA
124338712 5266 SBM View MSA
124247855 5268 Malvidae View MSA
124066341 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain