Gene : Carub.0006s0558 C. rubella v1.1
Defline:  (1 of 2) PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  558
Name:  ? Carub.0006s0558 Secondary Identifier:  ? PAC:39246106
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0558 0.5kb upstream 0.5kb upstream 3038 true scaffold_6: 2053305-2056342 Capsella rubella
Carub.0006s0558 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2053305-2053804 Capsella rubella
Carub.0006s0558 0.5kb downstream 0.5kb downstream 3038 true scaffold_6: 2053805-2056842 Capsella rubella
Carub.0006s0558 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2056343-2056842 Capsella rubella
Carub.0006s0558 1.0kb upstream 1.0kb upstream 3538 true scaffold_6: 2052805-2056342 Capsella rubella
Carub.0006s0558 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2052805-2053804 Capsella rubella
Carub.0006s0558 1.0kb downstream 1.0kb downstream 3538 true scaffold_6: 2053805-2057342 Capsella rubella
Carub.0006s0558 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2056343-2057342 Capsella rubella
Carub.0006s0558 2.0kb upstream 2.0kb upstream 4538 true scaffold_6: 2051805-2056342 Capsella rubella
Carub.0006s0558 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2051805-2053804 Capsella rubella
Carub.0006s0558 2.0kb downstream 2.0kb downstream 4538 true scaffold_6: 2053805-2058342 Capsella rubella
Carub.0006s0558 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2056343-2058342 Capsella rubella
Carub.0006s0558 5.0kb upstream 5.0kb upstream 7538 true scaffold_6: 2048805-2056342 Capsella rubella
Carub.0006s0558 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2048805-2053804 Capsella rubella
Carub.0006s0558 5.0kb downstream 5.0kb downstream 7538 true scaffold_6: 2053805-2061342 Capsella rubella
Carub.0006s0558 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2056343-2061342 Capsella rubella
Carub.0006s0558 10.0kb upstream 10.0kb upstream 12538 true scaffold_6: 2043805-2056342 Capsella rubella
Carub.0006s0558 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2043805-2053804 Capsella rubella
Carub.0006s0558 10.0kb downstream 10.0kb downstream 12538 true scaffold_6: 2053805-2066342 Capsella rubella
Carub.0006s0558 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2056343-2066342 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370881 5261 Brassicaceae View MSA
123840007 5264 Brassicales-Malvales View MSA
124342313 5266 SBM View MSA
124238783 5268 Malvidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain