Gene : Carub.0006s0330 C. rubella v1.1
Defline:  (1 of 44) PTHR31232//PTHR31232:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED Genomic Order:  330
Name:  ? Carub.0006s0330 Secondary Identifier:  ? PAC:39246226
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0330 0.5kb upstream 0.5kb upstream 1212 true scaffold_6: 1205232-1206443 Capsella rubella
Carub.0006s0330 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1205232-1205731 Capsella rubella
Carub.0006s0330 0.5kb downstream 0.5kb downstream 1212 true scaffold_6: 1205732-1206943 Capsella rubella
Carub.0006s0330 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1206444-1206943 Capsella rubella
Carub.0006s0330 1.0kb upstream 1.0kb upstream 1712 true scaffold_6: 1204732-1206443 Capsella rubella
Carub.0006s0330 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1204732-1205731 Capsella rubella
Carub.0006s0330 1.0kb downstream 1.0kb downstream 1712 true scaffold_6: 1205732-1207443 Capsella rubella
Carub.0006s0330 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1206444-1207443 Capsella rubella
Carub.0006s0330 2.0kb upstream 2.0kb upstream 2712 true scaffold_6: 1203732-1206443 Capsella rubella
Carub.0006s0330 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1203732-1205731 Capsella rubella
Carub.0006s0330 2.0kb downstream 2.0kb downstream 2712 true scaffold_6: 1205732-1208443 Capsella rubella
Carub.0006s0330 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1206444-1208443 Capsella rubella
Carub.0006s0330 5.0kb upstream 5.0kb upstream 5712 true scaffold_6: 1200732-1206443 Capsella rubella
Carub.0006s0330 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1200732-1205731 Capsella rubella
Carub.0006s0330 5.0kb downstream 5.0kb downstream 5712 true scaffold_6: 1205732-1211443 Capsella rubella
Carub.0006s0330 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1206444-1211443 Capsella rubella
Carub.0006s0330 10.0kb upstream 10.0kb upstream 10712 true scaffold_6: 1195732-1206443 Capsella rubella
Carub.0006s0330 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1195732-1205731 Capsella rubella
Carub.0006s0330 10.0kb downstream 10.0kb downstream 10712 true scaffold_6: 1205732-1216443 Capsella rubella
Carub.0006s0330 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1206444-1216443 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378479 5261 Brassicaceae View MSA
123801879 5264 Brassicales-Malvales View MSA
124299132 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain