Gene : Carub.0006s0366 C. rubella v1.1
Defline:  (1 of 3) PTHR11785//PTHR11785:SF331 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  366
Name:  ? Carub.0006s0366 Secondary Identifier:  ? PAC:39249460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0366 0.5kb upstream 0.5kb upstream 4027 true scaffold_6: 1353545-1357571 Capsella rubella
Carub.0006s0366 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 1353545-1354044 Capsella rubella
Carub.0006s0366 0.5kb downstream 0.5kb downstream 4027 true scaffold_6: 1354045-1358071 Capsella rubella
Carub.0006s0366 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 1357572-1358071 Capsella rubella
Carub.0006s0366 1.0kb upstream 1.0kb upstream 4527 true scaffold_6: 1353045-1357571 Capsella rubella
Carub.0006s0366 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 1353045-1354044 Capsella rubella
Carub.0006s0366 1.0kb downstream 1.0kb downstream 4527 true scaffold_6: 1354045-1358571 Capsella rubella
Carub.0006s0366 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 1357572-1358571 Capsella rubella
Carub.0006s0366 2.0kb upstream 2.0kb upstream 5527 true scaffold_6: 1352045-1357571 Capsella rubella
Carub.0006s0366 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 1352045-1354044 Capsella rubella
Carub.0006s0366 2.0kb downstream 2.0kb downstream 5527 true scaffold_6: 1354045-1359571 Capsella rubella
Carub.0006s0366 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 1357572-1359571 Capsella rubella
Carub.0006s0366 5.0kb upstream 5.0kb upstream 8527 true scaffold_6: 1349045-1357571 Capsella rubella
Carub.0006s0366 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 1349045-1354044 Capsella rubella
Carub.0006s0366 5.0kb downstream 5.0kb downstream 8527 true scaffold_6: 1354045-1362571 Capsella rubella
Carub.0006s0366 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 1357572-1362571 Capsella rubella
Carub.0006s0366 10.0kb upstream 10.0kb upstream 13527 true scaffold_6: 1344045-1357571 Capsella rubella
Carub.0006s0366 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 1344045-1354044 Capsella rubella
Carub.0006s0366 10.0kb downstream 10.0kb downstream 13527 true scaffold_6: 1354045-1367571 Capsella rubella
Carub.0006s0366 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 1357572-1367571 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366957 5261 Brassicaceae View MSA
123836836 5264 Brassicales-Malvales View MSA
124340147 5266 SBM View MSA
124246461 5268 Malvidae View MSA
124064415 5270 Rosid View MSA
123746808 5271 Pentapetalae View MSA
122795567 5272 Eudicot View MSA
122048717 5273 Angiosperm View MSA
121350782 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain