Gene : Carub.0006s0691 C. rubella v1.1
Defline:  (1 of 6) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins Genomic Order:  691
Name:  ? Carub.0006s0691 Secondary Identifier:  ? PAC:39248214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s0691 0.5kb upstream 0.5kb upstream 3416 true scaffold_6: 2542954-2546369 Capsella rubella
Carub.0006s0691 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2542954-2543453 Capsella rubella
Carub.0006s0691 0.5kb downstream 0.5kb downstream 3416 true scaffold_6: 2543454-2546869 Capsella rubella
Carub.0006s0691 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2546370-2546869 Capsella rubella
Carub.0006s0691 1.0kb upstream 1.0kb upstream 3916 true scaffold_6: 2542454-2546369 Capsella rubella
Carub.0006s0691 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2542454-2543453 Capsella rubella
Carub.0006s0691 1.0kb downstream 1.0kb downstream 3916 true scaffold_6: 2543454-2547369 Capsella rubella
Carub.0006s0691 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2546370-2547369 Capsella rubella
Carub.0006s0691 2.0kb upstream 2.0kb upstream 4916 true scaffold_6: 2541454-2546369 Capsella rubella
Carub.0006s0691 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2541454-2543453 Capsella rubella
Carub.0006s0691 2.0kb downstream 2.0kb downstream 4916 true scaffold_6: 2543454-2548369 Capsella rubella
Carub.0006s0691 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2546370-2548369 Capsella rubella
Carub.0006s0691 5.0kb upstream 5.0kb upstream 7916 true scaffold_6: 2538454-2546369 Capsella rubella
Carub.0006s0691 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2538454-2543453 Capsella rubella
Carub.0006s0691 5.0kb downstream 5.0kb downstream 7916 true scaffold_6: 2543454-2551369 Capsella rubella
Carub.0006s0691 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2546370-2551369 Capsella rubella
Carub.0006s0691 10.0kb upstream 10.0kb upstream 12916 true scaffold_6: 2533454-2546369 Capsella rubella
Carub.0006s0691 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2533454-2543453 Capsella rubella
Carub.0006s0691 10.0kb downstream 10.0kb downstream 12916 true scaffold_6: 2543454-2556369 Capsella rubella
Carub.0006s0691 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2546370-2556369 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360852 5261 Brassicaceae View MSA
123798045 5264 Brassicales-Malvales View MSA
124295727 5266 SBM View MSA
124148085 5268 Malvidae View MSA
124062853 5270 Rosid View MSA
123746510 5271 Pentapetalae View MSA
122790836 5272 Eudicot View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain