Protein Family : Replication factor-A protein 1-related 123426361

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
141493 (1 of 1) PF04057//PF08646//PF16900 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) S. moellendorffii v1.0 2525   scaffold_3: 422584-425108
30138.t000143 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT R. communis v0.1 3336   30138: 1018182-1021517
Cucsa.198280 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C. sativus v1.0 3786   scaffold01357: 1360232-1364017
orange1.1g006973m.g (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C. sinensis v1.1 3021   scaffold00030: 982611-985631
AT5G08020 (1 of 1) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins A. thaliana TAIR10 RPA70B 2773   Chr5: 2572107-2574879
AT5G61000 (1 of 5) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A. thaliana TAIR10 RPA70D 3146   Chr5: 24549578-24552723
Thhalv10013014m.g (1 of 5) PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) E. salsugineum v1.0 2940   scaffold_2: 2582470-2585409
Thhalv10003822m.g (1 of 5) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins E. salsugineum v1.0 3142   scaffold_6: 2616266-2619407
Ciclev10019317m.g (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C. clementina v1.0 3233   scaffold_3: 8225088-8228320
Lus10006548.g (1 of 5) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT L. usitatissimum v1.0 2990   scaffold1202: 62745-65734
Lus10040517.g (1 of 5) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT L. usitatissimum v1.0 2970   scaffold156: 13895-16864
Gorai.003G101500 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT G. raimondii v2.1 3613   Chr03: 31145196-31148808
e_gw1.17.24.1 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C. subellipsoidea C-169 v2.0 4860   scaffold_17: 1272168-1277027
fgenesh1_pm_17_num_102 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT M. pusilla CCMP1545 v3.0 2130   scaffold_17: 538043-540172
EuGene.0300010845 (1 of 2) PTHR23273 - REPLICATION FACTOR A 1, RFA1 M. sp RCC299 v3.0 2004   Chr_03: 1651234-1653237
estExt_Genewise_ext.C_Chr_170100 (1 of 3) PTHR23273 - REPLICATION FACTOR A 1, RFA1 O. lucimarinus v2.0 2136   Chr_17: 270072-272207
Thecc1EG014274 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT T. cacao v1.1 4057   scaffold_3: 21257720-21261776
Migut.I00367 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT M. guttatus v2.0 3797   scaffold_9: 7466687-7470483
Araha.2167s0005 (1 of 1) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins A. halleri v1.1 2972   Scaffold2167: 5013-7984
Araha.66448s0001 (1 of 1) PF01336//PF08646//PF16900 - OB-fold nucleic acid binding domain (tRNA_anti-codon) // Replication factor-A C terminal domain (Rep_fac-A_C) // Replication protein A OB domain (REPA_OB_2) A. halleri v1.1 2378   Scaffold66448: 3-2380
Cagra.0083s0011 (1 of 5) PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) C. grandiflora v1.1 3201   Scaffold83: 42856-46056
Cagra.1365s0008 (1 of 2) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins C. grandiflora v1.1 2957   Scaffold1365: 17660-20616
Glyma.05G020600 (1 of 2) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT G. max Wm82.a2.v1 5360   Chr05: 1836095-1841454
Glyma.17G078700 (1 of 2) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT G. max Wm82.a2.v1 3344   Chr17: 6130289-6133632
Brara.I00644 (1 of 7) PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) B. rapa FPsc v1.3 3094   A09: 3614979-3618072
Brara.C00322 (1 of 7) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins B. rapa FPsc v1.3 2992   A03: 1566488-1569479
Brara.C04221 (1 of 7) PF04057 - Replication factor-A protein 1, N-terminal domain (Rep-A_N) B. rapa FPsc v1.3 2961   A03: 22250018-22252978
Bostr.13129s0165 (1 of 1) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins B. stricta v1.2 3065   Scaffold13129: 714712-717776
Bostr.26833s0135 (1 of 9) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B. stricta v1.2 3196   Scaffold26833: 726324-729519
Cre16.g651000 (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C. reinhardtii v5.6 RFA3 6127   chromosome_16: 1231701-1237827

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
141493 S. moellendorffii v1.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
30138.m003969 R. communis v0.1 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
Cucsa.198280.1 C. sativus v1.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
orange1.1g006973m C. sinensis v1.1 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
AT5G61000.1 A. thaliana TAIR10 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
AT5G08020.1 A. thaliana TAIR10 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Thhalv10013014m E. salsugineum v1.0 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Thhalv10003822m E. salsugineum v1.0 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Ciclev10019317m C. clementina v1.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
Lus10040517 L. usitatissimum v1.0 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Lus10006548 L. usitatissimum v1.0 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Gorai.003G101500.1 G. raimondii v2.1 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
19010 C. subellipsoidea C-169 v2.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
207609 M. pusilla CCMP1545 v3.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
57417 M. sp RCC299 v3.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
51766 O. lucimarinus v2.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
Thecc1EG014274t1 T. cacao v1.1 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
Migut.I00367.1.p M. guttatus v2.0 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae
Araha.2167s0005.1.p A. halleri v1.1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Araha.66448s0001.1.p A. halleri v1.1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Cagra.1365s0008.1.p C. grandiflora v1.1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Cagra.0083s0011.1.p C. grandiflora v1.1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Glyma.05G020600.1.p G. max Wm82.a2.v1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Glyma.17G078700.1.p G. max Wm82.a2.v1 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Brara.I00644.1.p B. rapa FPsc v1.3 123426361 Replication factor-A protein 1-related 3 5275 Viridiplantae
Brara.C00322.1.p B. rapa FPsc v1.3 123426361 Replication factor-A protein 1-related 3 5275 Viridiplantae
Brara.C04221.1.p B. rapa FPsc v1.3 123426361 Replication factor-A protein 1-related 3 5275 Viridiplantae
Bostr.26833s0135.1.p B. stricta v1.2 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Bostr.13129s0165.1.p B. stricta v1.2 123426361 Replication factor-A protein 1-related 2 5275 Viridiplantae
Cre16.g651000.t1.2 C. reinhardtii v5.6 123426361 Replication factor-A protein 1-related 1 5275 Viridiplantae