Gene : RPA70B A. thaliana TAIR10
Primary Identifier:  ? AT5G08020 Defline:  (1 of 1) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
Genomic Order:  740 Name:  ? AT5G08020
Secondary Identifier:  ? PAC:19666251
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G08020 0.5kb upstream 0.5kb upstream 3273 true Chr5: 2571607-2574879 Arabidopsis thaliana
AT5G08020 0.5kb upstream 0.5kb upstream 500 false Chr5: 2571607-2572106 Arabidopsis thaliana
AT5G08020 0.5kb downstream 0.5kb downstream 3273 true Chr5: 2572107-2575379 Arabidopsis thaliana
AT5G08020 0.5kb downstream 0.5kb downstream 500 false Chr5: 2574880-2575379 Arabidopsis thaliana
AT5G08020 1.0kb upstream 1.0kb upstream 3773 true Chr5: 2571107-2574879 Arabidopsis thaliana
AT5G08020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2571107-2572106 Arabidopsis thaliana
AT5G08020 1.0kb downstream 1.0kb downstream 3773 true Chr5: 2572107-2575879 Arabidopsis thaliana
AT5G08020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2574880-2575879 Arabidopsis thaliana
AT5G08020 2.0kb upstream 2.0kb upstream 4773 true Chr5: 2570107-2574879 Arabidopsis thaliana
AT5G08020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2570107-2572106 Arabidopsis thaliana
AT5G08020 2.0kb downstream 2.0kb downstream 4773 true Chr5: 2572107-2576879 Arabidopsis thaliana
AT5G08020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2574880-2576879 Arabidopsis thaliana
AT5G08020 5.0kb upstream 5.0kb upstream 7773 true Chr5: 2567107-2574879 Arabidopsis thaliana
AT5G08020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2567107-2572106 Arabidopsis thaliana
AT5G08020 5.0kb downstream 5.0kb downstream 7773 true Chr5: 2572107-2579879 Arabidopsis thaliana
AT5G08020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2574880-2579879 Arabidopsis thaliana
AT5G08020 10.0kb upstream 10.0kb upstream 12773 true Chr5: 2562107-2574879 Arabidopsis thaliana
AT5G08020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2562107-2572106 Arabidopsis thaliana
AT5G08020 10.0kb downstream 10.0kb downstream 12773 true Chr5: 2572107-2584879 Arabidopsis thaliana
AT5G08020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2574880-2584879 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360852 5261 Brassicaceae View MSA
123798045 5264 Brassicales-Malvales View MSA
124295727 5266 SBM View MSA
124148085 5268 Malvidae View MSA
124062853 5270 Rosid View MSA
123746510 5271 Pentapetalae View MSA
122790836 5272 Eudicot View MSA
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.002        
cufflinks 3.573        
cufflinks 2.24        
cufflinks 3.667        
cufflinks 1.523       Low
cufflinks 5.338       High

0 Strain