Gene : RFA3 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g651000 Defline:  (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT
Genomic Order:  204 Name:  ? Cre16.g651000
Secondary Identifier:  ? PAC:30777595
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g651000 0.5kb upstream 0.5kb upstream 6627 true chromosome_16: 1231701-1238327 Chlamydomonas reinhardtii
Cre16.g651000 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1237828-1238327 Chlamydomonas reinhardtii
Cre16.g651000 0.5kb downstream 0.5kb downstream 6627 true chromosome_16: 1231201-1237827 Chlamydomonas reinhardtii
Cre16.g651000 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1231201-1231700 Chlamydomonas reinhardtii
Cre16.g651000 1.0kb upstream 1.0kb upstream 7127 true chromosome_16: 1231701-1238827 Chlamydomonas reinhardtii
Cre16.g651000 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1237828-1238827 Chlamydomonas reinhardtii
Cre16.g651000 1.0kb downstream 1.0kb downstream 7127 true chromosome_16: 1230701-1237827 Chlamydomonas reinhardtii
Cre16.g651000 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1230701-1231700 Chlamydomonas reinhardtii
Cre16.g651000 2.0kb upstream 2.0kb upstream 8127 true chromosome_16: 1231701-1239827 Chlamydomonas reinhardtii
Cre16.g651000 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1237828-1239827 Chlamydomonas reinhardtii
Cre16.g651000 2.0kb downstream 2.0kb downstream 8127 true chromosome_16: 1229701-1237827 Chlamydomonas reinhardtii
Cre16.g651000 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1229701-1231700 Chlamydomonas reinhardtii
Cre16.g651000 5.0kb upstream 5.0kb upstream 11127 true chromosome_16: 1231701-1242827 Chlamydomonas reinhardtii
Cre16.g651000 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1237828-1242827 Chlamydomonas reinhardtii
Cre16.g651000 5.0kb downstream 5.0kb downstream 11127 true chromosome_16: 1226701-1237827 Chlamydomonas reinhardtii
Cre16.g651000 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1226701-1231700 Chlamydomonas reinhardtii
Cre16.g651000 10.0kb upstream 10.0kb upstream 16127 true chromosome_16: 1231701-1247827 Chlamydomonas reinhardtii
Cre16.g651000 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1237828-1247827 Chlamydomonas reinhardtii
Cre16.g651000 10.0kb downstream 10.0kb downstream 16127 true chromosome_16: 1221701-1237827 Chlamydomonas reinhardtii
Cre16.g651000 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1221701-1231700 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108516 5260 Chlorophyte View MSA
123426361 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21        
cufflinks 6.376       High
cufflinks 5.82        
cufflinks 3.905        
cufflinks 2.483        
cufflinks 3.604        
cufflinks 6.334       High
cufflinks 6.759       High
cufflinks 0.161       Low
cufflinks 0.315        
cufflinks 2.123        
cufflinks 4.232        
cufflinks 1.431        
cufflinks 2.627        
cufflinks 2.882        
cufflinks 0.116     Low Low
cufflinks 0.125     Low Low
cufflinks 3.345        
cufflinks 0.023     Low Low
cufflinks 0.62        
cufflinks 1.037        
cufflinks 0.115       Low
cufflinks 12.369       High
cufflinks 2.394        
cufflinks 0.143       Low
cufflinks 4.13225 0.689727 7.57478   Low
cufflinks 3.89376 0.819024 6.96849   Low
cufflinks 7.5196 0.0 15.1166    
cufflinks 8.57417 0.90574 16.2426    
cufflinks 8.55122 1.68094 15.4215    

0 Strain